Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PKP4Q99569 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.93■□□□□ 0.78
PKP4Q99569 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PKP4Q99569 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PKP4Q99569 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PKP4Q99569 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.93■□□□□ 0.78
PKP4Q99569 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
PKP4Q99569 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PKP4Q99569 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.93■□□□□ 0.78
PKP4Q99569 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PKP4Q99569 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PKP4Q99569 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PKP4Q99569 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PKP4Q99569 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PKP4Q99569 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PKP4Q99569 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PKP4Q99569 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.92■□□□□ 0.78
PKP4Q99569 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PKP4Q99569 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.92■□□□□ 0.78
PKP4Q99569 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.92■□□□□ 0.78
PKP4Q99569 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
PKP4Q99569 MIR2861-201ENST00000636310 90 ntBASIC19.92■□□□□ 0.78
PKP4Q99569 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PKP4Q99569 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PKP4Q99569 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PKP4Q99569 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.92■□□□□ 0.78
PKP4Q99569 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.92■□□□□ 0.78
PKP4Q99569 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP4Q99569 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.91■□□□□ 0.78
PKP4Q99569 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP4Q99569 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.91■□□□□ 0.78
PKP4Q99569 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP4Q99569 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP4Q99569 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.91■□□□□ 0.78
PKP4Q99569 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.91■□□□□ 0.78
PKP4Q99569 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.91■□□□□ 0.78
PKP4Q99569 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.91■□□□□ 0.78
PKP4Q99569 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP4Q99569 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP4Q99569 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
PKP4Q99569 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PKP4Q99569 AL121603.2-201ENST00000557373 2117 ntBASIC19.91■□□□□ 0.78
PKP4Q99569 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PKP4Q99569 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PKP4Q99569 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP4Q99569 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKP4Q99569 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP4Q99569 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP4Q99569 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PKP4Q99569 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP4Q99569 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PKP4Q99569 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PKP4Q99569 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP4Q99569 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP4Q99569 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.9■□□□□ 0.78
PKP4Q99569 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP4Q99569 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
PKP4Q99569 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP4Q99569 AC069236.1-201ENST00000604339 616 ntBASIC19.9■□□□□ 0.78
PKP4Q99569 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PKP4Q99569 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PKP4Q99569 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PKP4Q99569 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PKP4Q99569 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
PKP4Q99569 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP4Q99569 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PKP4Q99569 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PKP4Q99569 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.9■□□□□ 0.78
PKP4Q99569 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKP4Q99569 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PKP4Q99569 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PKP4Q99569 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PKP4Q99569 MIR663A-201ENST00000385250 93 ntBASIC19.89■□□□□ 0.77
PKP4Q99569 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PKP4Q99569 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.89■□□□□ 0.77
PKP4Q99569 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.89■□□□□ 0.77
PKP4Q99569 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.89■□□□□ 0.77
PKP4Q99569 CROCCP5-201ENST00000436658 830 ntBASIC19.89■□□□□ 0.77
PKP4Q99569 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.89■□□□□ 0.77
PKP4Q99569 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PKP4Q99569 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PKP4Q99569 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PKP4Q99569 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PKP4Q99569 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.89■□□□□ 0.77
PKP4Q99569 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PKP4Q99569 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PKP4Q99569 AL050303.2-201ENST00000619798 666 ntBASIC19.89■□□□□ 0.77
PKP4Q99569 AC008694.1-202ENST00000636953 945 ntBASIC19.89■□□□□ 0.77
PKP4Q99569 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.89■□□□□ 0.77
PKP4Q99569 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PKP4Q99569 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PKP4Q99569 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
PKP4Q99569 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PKP4Q99569 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP4Q99569 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP4Q99569 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP4Q99569 CYP21A1P-202ENST00000354927 1481 ntBASIC19.88■□□□□ 0.77
PKP4Q99569 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.88■□□□□ 0.77
PKP4Q99569 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PKP4Q99569 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms