Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CALR3Q96L12 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.62■■□□□ 1.05
CALR3Q96L12 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CALR3Q96L12 DUX4L2-201ENST00000561772 1275 ntBASIC21.62■■□□□ 1.05
CALR3Q96L12 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CALR3Q96L12 AL139246.5-201ENST00000606645 996 ntBASIC21.62■■□□□ 1.05
CALR3Q96L12 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
CALR3Q96L12 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.62■■□□□ 1.05
CALR3Q96L12 DUX4L6-201ENST00000626483 1275 ntBASIC21.62■■□□□ 1.05
CALR3Q96L12 DUX4L1-201ENST00000627662 1275 ntBASIC21.62■■□□□ 1.05
CALR3Q96L12 DUX4L8-201ENST00000629013 1275 ntBASIC21.62■■□□□ 1.05
CALR3Q96L12 DUX4L3-201ENST00000630187 1275 ntBASIC21.62■■□□□ 1.05
CALR3Q96L12 DUX4L7-201ENST00000630678 1275 ntBASIC21.62■■□□□ 1.05
CALR3Q96L12 DUX4L5-201ENST00000630834 1275 ntBASIC21.62■■□□□ 1.05
CALR3Q96L12 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CALR3Q96L12 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CALR3Q96L12 AC099778.1-201ENST00000568593 1911 ntBASIC21.62■■□□□ 1.05
CALR3Q96L12 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CALR3Q96L12 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CALR3Q96L12 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CALR3Q96L12 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.61■■□□□ 1.05
CALR3Q96L12 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CALR3Q96L12 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.61■■□□□ 1.05
CALR3Q96L12 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.61■■□□□ 1.05
CALR3Q96L12 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.61■■□□□ 1.05
CALR3Q96L12 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.61■■□□□ 1.05
CALR3Q96L12 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
CALR3Q96L12 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.61■■□□□ 1.05
CALR3Q96L12 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CALR3Q96L12 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CALR3Q96L12 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.61■■□□□ 1.05
CALR3Q96L12 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CALR3Q96L12 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
CALR3Q96L12 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.6■■□□□ 1.05
CALR3Q96L12 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CALR3Q96L12 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
CALR3Q96L12 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CALR3Q96L12 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
CALR3Q96L12 PCDHAC2-203ENST00000615316 3011 ntBASIC21.6■■□□□ 1.05
CALR3Q96L12 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.6■■□□□ 1.05
CALR3Q96L12 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CALR3Q96L12 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.6■■□□□ 1.05
CALR3Q96L12 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.6■■□□□ 1.05
CALR3Q96L12 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.6■■□□□ 1.05
CALR3Q96L12 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.6■■□□□ 1.05
CALR3Q96L12 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CALR3Q96L12 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.6■■□□□ 1.05
CALR3Q96L12 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.6■■□□□ 1.05
CALR3Q96L12 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CALR3Q96L12 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CALR3Q96L12 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CALR3Q96L12 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CALR3Q96L12 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CALR3Q96L12 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CALR3Q96L12 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CALR3Q96L12 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CALR3Q96L12 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CALR3Q96L12 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.59■■□□□ 1.05
CALR3Q96L12 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CALR3Q96L12 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.59■■□□□ 1.05
CALR3Q96L12 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.59■■□□□ 1.05
CALR3Q96L12 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CALR3Q96L12 CCDC92B-201ENST00000575506 885 ntBASIC21.59■■□□□ 1.05
CALR3Q96L12 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.59■■□□□ 1.05
CALR3Q96L12 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CALR3Q96L12 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CALR3Q96L12 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CALR3Q96L12 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CALR3Q96L12 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CALR3Q96L12 LINC02228-203ENST00000641970 1355 ntBASIC21.59■■□□□ 1.05
CALR3Q96L12 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
CALR3Q96L12 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CALR3Q96L12 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CALR3Q96L12 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CALR3Q96L12 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.58■■□□□ 1.05
CALR3Q96L12 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CALR3Q96L12 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.58■■□□□ 1.05
CALR3Q96L12 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CALR3Q96L12 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CALR3Q96L12 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CALR3Q96L12 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.58■■□□□ 1.05
CALR3Q96L12 AC142381.2-201ENST00000566120 298 ntBASIC21.58■■□□□ 1.05
CALR3Q96L12 AC243732.1-201ENST00000612648 864 ntBASIC21.58■■□□□ 1.05
CALR3Q96L12 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.58■■□□□ 1.05
CALR3Q96L12 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CALR3Q96L12 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CALR3Q96L12 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CALR3Q96L12 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.57■■□□□ 1.04
CALR3Q96L12 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CALR3Q96L12 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CALR3Q96L12 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.57■■□□□ 1.04
CALR3Q96L12 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.57■■□□□ 1.04
CALR3Q96L12 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CALR3Q96L12 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CALR3Q96L12 SLC7A5P1-201ENST00000568957 537 ntBASIC21.57■■□□□ 1.04
CALR3Q96L12 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.57■■□□□ 1.04
CALR3Q96L12 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CALR3Q96L12 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CALR3Q96L12 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CALR3Q96L12 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms