Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CPNE2Q96FN4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 AC245052.3-201ENST00000450182 901 ntBASIC17.71■□□□□ 0.43
CPNE2Q96FN4 TPRG1LP1-201ENST00000598702 760 ntBASIC17.71■□□□□ 0.43
CPNE2Q96FN4 AC110285.6-201ENST00000617652 491 ntBASIC17.71■□□□□ 0.43
CPNE2Q96FN4 AL136967.2-201ENST00000623968 743 ntBASIC17.71■□□□□ 0.43
CPNE2Q96FN4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 KRT16P2-201ENST00000414673 1423 ntBASIC17.71■□□□□ 0.43
CPNE2Q96FN4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPNE2Q96FN4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CPNE2Q96FN4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
CPNE2Q96FN4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE2Q96FN4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE2Q96FN4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CPNE2Q96FN4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE2Q96FN4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CPNE2Q96FN4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE2Q96FN4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE2Q96FN4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.7■□□□□ 0.42
CPNE2Q96FN4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.7■□□□□ 0.42
CPNE2Q96FN4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.7■□□□□ 0.42
CPNE2Q96FN4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.7■□□□□ 0.42
CPNE2Q96FN4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE2Q96FN4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE2Q96FN4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE2Q96FN4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 AC020907.5-201ENST00000624372 1936 ntBASIC17.69■□□□□ 0.42
CPNE2Q96FN4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 AC073314.1-201ENST00000568729 2216 ntBASIC17.69■□□□□ 0.42
CPNE2Q96FN4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE2Q96FN4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 AC061975.6-201ENST00000579045 1553 ntBASIC17.68■□□□□ 0.42
CPNE2Q96FN4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 FP700111.2-201ENST00000619190 1892 ntBASIC17.68■□□□□ 0.42
CPNE2Q96FN4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE2Q96FN4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE2Q96FN4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms