Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TMEM54Q969K7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM54Q969K7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM54Q969K7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM54Q969K7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM54Q969K7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM54Q969K7 CDCA4P2-201ENST00000441182 718 ntBASIC18.06■□□□□ 0.48
TMEM54Q969K7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM54Q969K7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM54Q969K7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM54Q969K7 AC069236.1-201ENST00000604339 616 ntBASIC18.06■□□□□ 0.48
TMEM54Q969K7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM54Q969K7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
TMEM54Q969K7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM54Q969K7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM54Q969K7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TMEM54Q969K7 AL157384.1-201ENST00000445995 2473 ntBASIC18.06■□□□□ 0.48
TMEM54Q969K7 AC087633.2-202ENST00000565166 1439 ntBASIC18.06■□□□□ 0.48
TMEM54Q969K7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM54Q969K7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM54Q969K7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.05■□□□□ 0.48
TMEM54Q969K7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM54Q969K7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM54Q969K7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM54Q969K7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM54Q969K7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM54Q969K7 PGM5P4-201ENST00000421970 445 ntBASIC18.05■□□□□ 0.48
TMEM54Q969K7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM54Q969K7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.05■□□□□ 0.48
TMEM54Q969K7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.05■□□□□ 0.48
TMEM54Q969K7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.05■□□□□ 0.48
TMEM54Q969K7 AC005181.1-201ENST00000604782 1256 ntBASIC18.05■□□□□ 0.48
TMEM54Q969K7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM54Q969K7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM54Q969K7 AC020907.5-201ENST00000624372 1936 ntBASIC18.05■□□□□ 0.48
TMEM54Q969K7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.05■□□□□ 0.48
TMEM54Q969K7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM54Q969K7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM54Q969K7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM54Q969K7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM54Q969K7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM54Q969K7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM54Q969K7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM54Q969K7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM54Q969K7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM54Q969K7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEM54Q969K7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
TMEM54Q969K7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.04■□□□□ 0.48
TMEM54Q969K7 LINC01521-201ENST00000504184 1943 ntBASIC18.04■□□□□ 0.48
TMEM54Q969K7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TMEM54Q969K7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM54Q969K7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM54Q969K7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM54Q969K7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM54Q969K7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.04■□□□□ 0.48
TMEM54Q969K7 OR10C1-204ENST00000622521 1039 ntBASIC18.04■□□□□ 0.48
TMEM54Q969K7 AC008694.1-202ENST00000636953 945 ntBASIC18.04■□□□□ 0.48
TMEM54Q969K7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM54Q969K7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM54Q969K7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEM54Q969K7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM54Q969K7 AC092720.2-201ENST00000602388 1665 ntBASIC18.03■□□□□ 0.48
TMEM54Q969K7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM54Q969K7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TMEM54Q969K7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEM54Q969K7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM54Q969K7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM54Q969K7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM54Q969K7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM54Q969K7 MCRIP2P1-201ENST00000394346 511 ntBASIC18.03■□□□□ 0.48
TMEM54Q969K7 RAP2CP1-201ENST00000605103 478 ntBASIC18.03■□□□□ 0.48
TMEM54Q969K7 AL356652.1-201ENST00000615962 565 ntBASIC18.03■□□□□ 0.48
TMEM54Q969K7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM54Q969K7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM54Q969K7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM54Q969K7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TMEM54Q969K7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEM54Q969K7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM54Q969K7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TMEM54Q969K7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM54Q969K7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM54Q969K7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM54Q969K7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM54Q969K7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM54Q969K7 LINC01006-201ENST00000333319 2292 ntBASIC18.02■□□□□ 0.48
TMEM54Q969K7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM54Q969K7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM54Q969K7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM54Q969K7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM54Q969K7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM54Q969K7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM54Q969K7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.02■□□□□ 0.48
TMEM54Q969K7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
TMEM54Q969K7 AC026185.1-201ENST00000445748 174 ntBASIC18.02■□□□□ 0.48
TMEM54Q969K7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM54Q969K7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TMEM54Q969K7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM54Q969K7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM54Q969K7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM54Q969K7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms