Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RPGRQ92834 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.36■■□□□ 1.65
RPGRQ92834 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
RPGRQ92834 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RPGRQ92834 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.36■■□□□ 1.65
RPGRQ92834 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RPGRQ92834 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC25.36■■□□□ 1.65
RPGRQ92834 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC25.36■■□□□ 1.65
RPGRQ92834 MIR4785-201ENST00000585005 73 ntBASIC25.36■■□□□ 1.65
RPGRQ92834 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.36■■□□□ 1.65
RPGRQ92834 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RPGRQ92834 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RPGRQ92834 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RPGRQ92834 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RPGRQ92834 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RPGRQ92834 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RPGRQ92834 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RPGRQ92834 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.35■■□□□ 1.65
RPGRQ92834 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.35■■□□□ 1.65
RPGRQ92834 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RPGRQ92834 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC25.35■■□□□ 1.65
RPGRQ92834 KRT18P21-201ENST00000515767 1272 ntBASIC25.35■■□□□ 1.65
RPGRQ92834 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC25.35■■□□□ 1.65
RPGRQ92834 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.35■■□□□ 1.65
RPGRQ92834 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RPGRQ92834 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RPGRQ92834 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.34■■□□□ 1.65
RPGRQ92834 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RPGRQ92834 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RPGRQ92834 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RPGRQ92834 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.34■■□□□ 1.65
RPGRQ92834 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.34■■□□□ 1.65
RPGRQ92834 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RPGRQ92834 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RPGRQ92834 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
RPGRQ92834 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC25.34■■□□□ 1.65
RPGRQ92834 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.34■■□□□ 1.65
RPGRQ92834 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC25.34■■□□□ 1.65
RPGRQ92834 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC25.34■■□□□ 1.65
RPGRQ92834 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.34■■□□□ 1.65
RPGRQ92834 AC113410.3-201ENST00000623366 203 ntBASIC25.34■■□□□ 1.65
RPGRQ92834 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC25.34■■□□□ 1.65
RPGRQ92834 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RPGRQ92834 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC25.34■■□□□ 1.65
RPGRQ92834 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RPGRQ92834 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RPGRQ92834 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RPGRQ92834 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
RPGRQ92834 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RPGRQ92834 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC25.33■■□□□ 1.65
RPGRQ92834 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RPGRQ92834 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RPGRQ92834 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
RPGRQ92834 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC25.33■■□□□ 1.65
RPGRQ92834 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.33■■□□□ 1.65
RPGRQ92834 CABP2-204ENST00000636477 941 ntTSL 5 BASIC25.33■■□□□ 1.65
RPGRQ92834 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
RPGRQ92834 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
RPGRQ92834 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
RPGRQ92834 AC242852.2-201ENST00000615738 1807 ntBASIC25.33■■□□□ 1.64
RPGRQ92834 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.32■■□□□ 1.64
RPGRQ92834 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
RPGRQ92834 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.32■■□□□ 1.64
RPGRQ92834 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RPGRQ92834 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RPGRQ92834 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RPGRQ92834 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RPGRQ92834 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC25.32■■□□□ 1.64
RPGRQ92834 PRKY-204ENST00000533551 1019 ntBASIC25.32■■□□□ 1.64
RPGRQ92834 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
RPGRQ92834 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.32■■□□□ 1.64
RPGRQ92834 AC010331.1-201ENST00000611423 582 ntBASIC25.32■■□□□ 1.64
RPGRQ92834 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RPGRQ92834 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RPGRQ92834 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
RPGRQ92834 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
RPGRQ92834 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
RPGRQ92834 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.31■■□□□ 1.64
RPGRQ92834 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.31■■□□□ 1.64
RPGRQ92834 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
RPGRQ92834 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25.31■■□□□ 1.64
RPGRQ92834 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.31■■□□□ 1.64
RPGRQ92834 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC25.31■■□□□ 1.64
RPGRQ92834 RARRES2P10-201ENST00000564312 460 ntBASIC25.31■■□□□ 1.64
RPGRQ92834 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC25.31■■□□□ 1.64
RPGRQ92834 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RPGRQ92834 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.31■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms