Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAM1L1Q8N609 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 AC073210.2-201ENST00000430369 194 ntBASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAM1L1Q8N609 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 AC133041.1-202ENST00000642053 222 ntBASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 KRT8P36-201ENST00000489121 1440 ntBASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAM1L1Q8N609 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAM1L1Q8N609 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAM1L1Q8N609 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.25■□□□□ 0.83
TRAM1L1Q8N609 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.25■□□□□ 0.83
TRAM1L1Q8N609 AC069152.1-201ENST00000438030 544 ntBASIC20.25■□□□□ 0.83
TRAM1L1Q8N609 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAM1L1Q8N609 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRAM1L1Q8N609 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAM1L1Q8N609 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAM1L1Q8N609 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.25■□□□□ 0.83
TRAM1L1Q8N609 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAM1L1Q8N609 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAM1L1Q8N609 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAM1L1Q8N609 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAM1L1Q8N609 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRAM1L1Q8N609 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAM1L1Q8N609 AC007225.1-201ENST00000566331 1836 ntBASIC20.23■□□□□ 0.83
TRAM1L1Q8N609 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.23■□□□□ 0.83
TRAM1L1Q8N609 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAM1L1Q8N609 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAM1L1Q8N609 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAM1L1Q8N609 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAM1L1Q8N609 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRAM1L1Q8N609 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAM1L1Q8N609 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.23■□□□□ 0.83
TRAM1L1Q8N609 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAM1L1Q8N609 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAM1L1Q8N609 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
TRAM1L1Q8N609 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAM1L1Q8N609 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAM1L1Q8N609 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.22■□□□□ 0.83
TRAM1L1Q8N609 FP700111.2-201ENST00000619190 1892 ntBASIC20.22■□□□□ 0.83
TRAM1L1Q8N609 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms