Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
C11orf42Q8N5U0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
C11orf42Q8N5U0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17■□□□□ 0.31
C11orf42Q8N5U0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17■□□□□ 0.31
C11orf42Q8N5U0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17■□□□□ 0.31
C11orf42Q8N5U0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 AL137060.1-201ENST00000618151 2648 ntBASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 AL162412.1-201ENST00000567129 965 ntBASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 AL591742.1-201ENST00000604433 565 ntBASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
C11orf42Q8N5U0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 AL050303.2-201ENST00000619798 666 ntBASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
C11orf42Q8N5U0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 AC090192.1-201ENST00000517740 490 ntBASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
C11orf42Q8N5U0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 AC016405.3-201ENST00000607710 860 ntBASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 AC116050.2-201ENST00000612102 1779 ntBASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
C11orf42Q8N5U0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
C11orf42Q8N5U0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
C11orf42Q8N5U0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
C11orf42Q8N5U0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
C11orf42Q8N5U0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf42Q8N5U0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf42Q8N5U0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf42Q8N5U0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf42Q8N5U0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.95■□□□□ 0.3
C11orf42Q8N5U0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C11orf42Q8N5U0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms