Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
VPS8Q8N3P4 UNC93B5-201ENST00000530315 699 ntBASIC32.17■■■□□ 2.74
VPS8Q8N3P4 C2orf69P4-201ENST00000565394 541 ntBASIC32.17■■■□□ 2.74
VPS8Q8N3P4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 HES2-205ENST00000487437 968 ntTSL 3 BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 SLC29A4P2-201ENST00000504749 1089 ntBASIC32.16■■■□□ 2.74
VPS8Q8N3P4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
VPS8Q8N3P4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC32.15■■■□□ 2.74
VPS8Q8N3P4 AC006128.1-201ENST00000624704 1661 ntBASIC32.15■■■□□ 2.74
VPS8Q8N3P4 TSPY20P-201ENST00000450910 630 ntBASIC32.15■■■□□ 2.74
VPS8Q8N3P4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
VPS8Q8N3P4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
VPS8Q8N3P4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
VPS8Q8N3P4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC32.14■■■□□ 2.74
VPS8Q8N3P4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC32.14■■■□□ 2.74
VPS8Q8N3P4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC32.14■■■□□ 2.74
VPS8Q8N3P4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
VPS8Q8N3P4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC32.14■■■□□ 2.73
VPS8Q8N3P4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC32.14■■■□□ 2.73
VPS8Q8N3P4 AL121603.2-201ENST00000557373 2117 ntBASIC32.14■■■□□ 2.73
VPS8Q8N3P4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
VPS8Q8N3P4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
VPS8Q8N3P4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
VPS8Q8N3P4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
VPS8Q8N3P4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
VPS8Q8N3P4 PNMA6B-201ENST00000538162 1200 ntBASIC32.13■■■□□ 2.73
VPS8Q8N3P4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC32.13■■■□□ 2.73
VPS8Q8N3P4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
VPS8Q8N3P4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
VPS8Q8N3P4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
VPS8Q8N3P4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
VPS8Q8N3P4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC32.12■■■□□ 2.73
VPS8Q8N3P4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC32.12■■■□□ 2.73
VPS8Q8N3P4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
VPS8Q8N3P4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
VPS8Q8N3P4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
VPS8Q8N3P4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC32.12■■■□□ 2.73
VPS8Q8N3P4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
VPS8Q8N3P4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
VPS8Q8N3P4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
VPS8Q8N3P4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
VPS8Q8N3P4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
VPS8Q8N3P4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC32.12■■■□□ 2.73
VPS8Q8N3P4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC32.11■■■□□ 2.73
VPS8Q8N3P4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
VPS8Q8N3P4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
VPS8Q8N3P4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
VPS8Q8N3P4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
VPS8Q8N3P4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC32.11■■■□□ 2.73
VPS8Q8N3P4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
VPS8Q8N3P4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC32.11■■■□□ 2.73
VPS8Q8N3P4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
VPS8Q8N3P4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
VPS8Q8N3P4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC32.11■■■□□ 2.73
VPS8Q8N3P4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
VPS8Q8N3P4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
VPS8Q8N3P4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
VPS8Q8N3P4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms