Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 ME2-218ENST00000640965 2476 ntTSL 5 BASIC25.4■■□□□ 1.66
SMC5Q8IY18 KRT8P36-201ENST00000489121 1440 ntBASIC25.4■■□□□ 1.66
SMC5Q8IY18 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.4■■□□□ 1.66
SMC5Q8IY18 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMC5Q8IY18 AC112907.3-201ENST00000577781 2400 ntBASIC25.4■■□□□ 1.66
SMC5Q8IY18 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMC5Q8IY18 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMC5Q8IY18 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMC5Q8IY18 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.4■■□□□ 1.66
SMC5Q8IY18 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
SMC5Q8IY18 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.4■■□□□ 1.66
SMC5Q8IY18 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SMC5Q8IY18 AC087623.3-201ENST00000607047 1098 ntBASIC25.4■■□□□ 1.66
SMC5Q8IY18 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC25.4■■□□□ 1.66
SMC5Q8IY18 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SMC5Q8IY18 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.4■■□□□ 1.66
SMC5Q8IY18 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.4■■□□□ 1.66
SMC5Q8IY18 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
SMC5Q8IY18 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SMC5Q8IY18 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SMC5Q8IY18 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC25.39■■□□□ 1.66
SMC5Q8IY18 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SMC5Q8IY18 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SMC5Q8IY18 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SMC5Q8IY18 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.39■■□□□ 1.66
SMC5Q8IY18 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.39■■□□□ 1.65
SMC5Q8IY18 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SMC5Q8IY18 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SMC5Q8IY18 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.65
SMC5Q8IY18 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC25.39■■□□□ 1.65
SMC5Q8IY18 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
SMC5Q8IY18 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SMC5Q8IY18 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SMC5Q8IY18 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SMC5Q8IY18 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.38■■□□□ 1.65
SMC5Q8IY18 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
SMC5Q8IY18 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SMC5Q8IY18 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SMC5Q8IY18 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.38■■□□□ 1.65
SMC5Q8IY18 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC25.38■■□□□ 1.65
SMC5Q8IY18 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.38■■□□□ 1.65
SMC5Q8IY18 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
SMC5Q8IY18 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.38■■□□□ 1.65
SMC5Q8IY18 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SMC5Q8IY18 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SMC5Q8IY18 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.38■■□□□ 1.65
SMC5Q8IY18 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
SMC5Q8IY18 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SMC5Q8IY18 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
SMC5Q8IY18 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC25.37■■□□□ 1.65
SMC5Q8IY18 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.37■■□□□ 1.65
SMC5Q8IY18 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SMC5Q8IY18 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
SMC5Q8IY18 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SMC5Q8IY18 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
SMC5Q8IY18 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.37■■□□□ 1.65
SMC5Q8IY18 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SMC5Q8IY18 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC25.37■■□□□ 1.65
SMC5Q8IY18 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SMC5Q8IY18 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
SMC5Q8IY18 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC25.37■■□□□ 1.65
SMC5Q8IY18 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
SMC5Q8IY18 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC25.37■■□□□ 1.65
SMC5Q8IY18 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SMC5Q8IY18 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC25.36■■□□□ 1.65
SMC5Q8IY18 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.36■■□□□ 1.65
SMC5Q8IY18 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SMC5Q8IY18 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
SMC5Q8IY18 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMC5Q8IY18 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SMC5Q8IY18 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMC5Q8IY18 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SMC5Q8IY18 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC25.36■■□□□ 1.65
SMC5Q8IY18 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
SMC5Q8IY18 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMC5Q8IY18 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25.35■■□□□ 1.65
SMC5Q8IY18 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMC5Q8IY18 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.35■■□□□ 1.65
SMC5Q8IY18 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.35■■□□□ 1.65
SMC5Q8IY18 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.35■■□□□ 1.65
SMC5Q8IY18 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC25.35■■□□□ 1.65
SMC5Q8IY18 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC25.35■■□□□ 1.65
SMC5Q8IY18 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMC5Q8IY18 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.35■■□□□ 1.65
SMC5Q8IY18 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC25.35■■□□□ 1.65
SMC5Q8IY18 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SMC5Q8IY18 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC25.34■■□□□ 1.65
SMC5Q8IY18 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.34■■□□□ 1.65
SMC5Q8IY18 AC010536.3-201ENST00000620306 533 ntBASIC25.34■■□□□ 1.65
SMC5Q8IY18 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
SMC5Q8IY18 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SMC5Q8IY18 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
SMC5Q8IY18 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC25.34■■□□□ 1.65
SMC5Q8IY18 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25.34■■□□□ 1.65
SMC5Q8IY18 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.34■■□□□ 1.65
SMC5Q8IY18 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMC5Q8IY18 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SMC5Q8IY18 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMC5Q8IY18 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMC5Q8IY18 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms