Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.28■■□□□ 1
NPAS3Q8IXF0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPAS3Q8IXF0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.28■■□□□ 1
NPAS3Q8IXF0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPAS3Q8IXF0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.28■■□□□ 1
NPAS3Q8IXF0 PGM5P4-201ENST00000421970 445 ntBASIC21.28■■□□□ 1
NPAS3Q8IXF0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPAS3Q8IXF0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.28■■□□□ 1
NPAS3Q8IXF0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
NPAS3Q8IXF0 AC005829.2-201ENST00000571422 1056 ntBASIC21.28■■□□□ 1
NPAS3Q8IXF0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.28■■□□□ 1
NPAS3Q8IXF0 AC233702.5-201ENST00000584107 538 ntBASIC21.28■■□□□ 1
NPAS3Q8IXF0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.28■■□□□ 1
NPAS3Q8IXF0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NPAS3Q8IXF0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.28■■□□□ 1
NPAS3Q8IXF0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.28■■□□□ 1
NPAS3Q8IXF0 AC120498.8-201ENST00000614275 531 ntBASIC21.28■■□□□ 1
NPAS3Q8IXF0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.28■■□□□ 1
NPAS3Q8IXF0 AL023875.1-201ENST00000640777 796 ntBASIC21.28■■□□□ 1
NPAS3Q8IXF0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.28■■□□□ 1
NPAS3Q8IXF0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.28■■□□□ 1
NPAS3Q8IXF0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPAS3Q8IXF0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.28■■□□□ 1
NPAS3Q8IXF0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPAS3Q8IXF0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.28■■□□□ 1
NPAS3Q8IXF0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
NPAS3Q8IXF0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.27■■□□□ 1
NPAS3Q8IXF0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.27■■□□□ 1
NPAS3Q8IXF0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
NPAS3Q8IXF0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.27■■□□□ 1
NPAS3Q8IXF0 RPS2P55-201ENST00000397318 883 ntBASIC21.27■■□□□ 1
NPAS3Q8IXF0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
NPAS3Q8IXF0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPAS3Q8IXF0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.27■■□□□ 1
NPAS3Q8IXF0 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.27■■□□□ 1
NPAS3Q8IXF0 AC133681.1-201ENST00000465482 601 ntBASIC21.27■■□□□ 1
NPAS3Q8IXF0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NPAS3Q8IXF0 AC107956.1-201ENST00000494359 873 ntBASIC21.27■■□□□ 1
NPAS3Q8IXF0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.27■■□□□ 1
NPAS3Q8IXF0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.27■■□□□ 1
NPAS3Q8IXF0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.27■■□□□ 1
NPAS3Q8IXF0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.27■■□□□ 1
NPAS3Q8IXF0 AC006557.6-201ENST00000623071 864 ntBASIC21.27■■□□□ 1
NPAS3Q8IXF0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.27■■□□□ 1
NPAS3Q8IXF0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
NPAS3Q8IXF0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NPAS3Q8IXF0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NPAS3Q8IXF0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
NPAS3Q8IXF0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 AC239809.2-201ENST00000415381 517 ntBASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 AC242852.2-201ENST00000615738 1807 ntBASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS3Q8IXF0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 AL356652.1-201ENST00000615962 565 ntBASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPAS3Q8IXF0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPAS3Q8IXF0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPAS3Q8IXF0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.24■□□□□ 0.99
NPAS3Q8IXF0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NPAS3Q8IXF0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NPAS3Q8IXF0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPAS3Q8IXF0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NPAS3Q8IXF0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
NPAS3Q8IXF0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPAS3Q8IXF0 AC211429.1-201ENST00000415277 523 ntBASIC21.24■□□□□ 0.99
NPAS3Q8IXF0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NPAS3Q8IXF0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NPAS3Q8IXF0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.24■□□□□ 0.99
NPAS3Q8IXF0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
NPAS3Q8IXF0 REXO1L12P-201ENST00000622156 912 ntBASIC21.24■□□□□ 0.99
NPAS3Q8IXF0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms