Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CBWD2Q8IUF1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CBWD2Q8IUF1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.26■■□□□ 1.15
CBWD2Q8IUF1 AC083906.2-201ENST00000511578 360 ntBASIC22.26■■□□□ 1.15
CBWD2Q8IUF1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.26■■□□□ 1.15
CBWD2Q8IUF1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CBWD2Q8IUF1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.26■■□□□ 1.15
CBWD2Q8IUF1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CBWD2Q8IUF1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CBWD2Q8IUF1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CBWD2Q8IUF1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.26■■□□□ 1.15
CBWD2Q8IUF1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.26■■□□□ 1.15
CBWD2Q8IUF1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 AL512625.2-201ENST00000417533 625 ntBASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 AL121832.2-201ENST00000610979 668 ntBASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 AC100791.3-201ENST00000617619 330 ntBASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 PKD1P6-201ENST00000343738 4769 ntBASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CBWD2Q8IUF1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 MCRIP2P1-201ENST00000394346 511 ntBASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CBWD2Q8IUF1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 AC087633.2-202ENST00000565166 1439 ntBASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 AL157384.1-201ENST00000445995 2473 ntBASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 GUSBP6-202ENST00000438529 1198 ntBASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CBWD2Q8IUF1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 CYP2T3P-201ENST00000601990 817 ntBASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CBWD2Q8IUF1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CBWD2Q8IUF1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CBWD2Q8IUF1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms