Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF39Q86UA1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF39Q86UA1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF39Q86UA1 AL121603.2-201ENST00000557373 2117 ntBASIC21.16■□□□□ 0.98
PRPF39Q86UA1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.16■□□□□ 0.98
PRPF39Q86UA1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.16■□□□□ 0.98
PRPF39Q86UA1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF39Q86UA1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF39Q86UA1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF39Q86UA1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.16■□□□□ 0.98
PRPF39Q86UA1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.16■□□□□ 0.98
PRPF39Q86UA1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
PRPF39Q86UA1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF39Q86UA1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF39Q86UA1 AC120498.10-201ENST00000621827 505 ntBASIC21.16■□□□□ 0.98
PRPF39Q86UA1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PRPF39Q86UA1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
PRPF39Q86UA1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF39Q86UA1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.15■□□□□ 0.98
PRPF39Q86UA1 KRT16P2-201ENST00000414673 1423 ntBASIC21.15■□□□□ 0.98
PRPF39Q86UA1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.15■□□□□ 0.98
PRPF39Q86UA1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.15■□□□□ 0.98
PRPF39Q86UA1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.15■□□□□ 0.98
PRPF39Q86UA1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.15■□□□□ 0.98
PRPF39Q86UA1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.15■□□□□ 0.98
PRPF39Q86UA1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
PRPF39Q86UA1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PRPF39Q86UA1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF39Q86UA1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.15■□□□□ 0.98
PRPF39Q86UA1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF39Q86UA1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF39Q86UA1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRPF39Q86UA1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
PRPF39Q86UA1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRPF39Q86UA1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRPF39Q86UA1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
PRPF39Q86UA1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRPF39Q86UA1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.14■□□□□ 0.98
PRPF39Q86UA1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PRPF39Q86UA1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.14■□□□□ 0.98
PRPF39Q86UA1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.14■□□□□ 0.97
PRPF39Q86UA1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PRPF39Q86UA1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRPF39Q86UA1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.14■□□□□ 0.97
PRPF39Q86UA1 SLC29A4P1-201ENST00000398760 971 ntBASIC21.14■□□□□ 0.97
PRPF39Q86UA1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PRPF39Q86UA1 CNN2P6-201ENST00000439038 900 ntBASIC21.14■□□□□ 0.97
PRPF39Q86UA1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.14■□□□□ 0.97
PRPF39Q86UA1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.14■□□□□ 0.97
PRPF39Q86UA1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 TSPY6P-201ENST00000448518 926 ntBASIC21.13■□□□□ 0.97
PRPF39Q86UA1 TERF1P5-201ENST00000477545 1207 ntBASIC21.13■□□□□ 0.97
PRPF39Q86UA1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.13■□□□□ 0.97
PRPF39Q86UA1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRPF39Q86UA1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
PRPF39Q86UA1 AC006128.1-201ENST00000624704 1661 ntBASIC21.12■□□□□ 0.97
PRPF39Q86UA1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRPF39Q86UA1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRPF39Q86UA1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRPF39Q86UA1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
PRPF39Q86UA1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.12■□□□□ 0.97
PRPF39Q86UA1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRPF39Q86UA1 AC013268.1-206ENST00000638368 961 ntBASIC21.12■□□□□ 0.97
PRPF39Q86UA1 AC112229.1-201ENST00000639295 961 ntBASIC21.12■□□□□ 0.97
PRPF39Q86UA1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRPF39Q86UA1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRPF39Q86UA1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRPF39Q86UA1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRPF39Q86UA1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.12■□□□□ 0.97
PRPF39Q86UA1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRPF39Q86UA1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRPF39Q86UA1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRPF39Q86UA1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRPF39Q86UA1 AF201337.1-201ENST00000520239 748 ntBASIC21.11■□□□□ 0.97
PRPF39Q86UA1 AC142086.2-201ENST00000569753 217 ntBASIC21.11■□□□□ 0.97
PRPF39Q86UA1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PRPF39Q86UA1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.11■□□□□ 0.97
PRPF39Q86UA1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRPF39Q86UA1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
PRPF39Q86UA1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRPF39Q86UA1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms