Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 LINC01568-207ENST00000641790 1380 ntBASIC17.42■□□□□ 0.38
CSMD2Q7Z408 AL390955.1-201ENST00000428694 934 ntBASIC17.42■□□□□ 0.38
CSMD2Q7Z408 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSMD2Q7Z408 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
CSMD2Q7Z408 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 FAM197Y1-201ENST00000421178 764 ntBASIC17.4■□□□□ 0.38
CSMD2Q7Z408 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 AL031963.3-201ENST00000606441 850 ntBASIC17.4■□□□□ 0.38
CSMD2Q7Z408 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSMD2Q7Z408 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 CYP21A1P-202ENST00000354927 1481 ntBASIC17.39■□□□□ 0.37
CSMD2Q7Z408 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 AL355355.2-201ENST00000442321 338 ntBASIC17.39■□□□□ 0.37
CSMD2Q7Z408 AC068473.5-201ENST00000616428 2072 ntBASIC17.39■□□□□ 0.37
CSMD2Q7Z408 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 CDV3P1-201ENST00000471403 739 ntBASIC17.39■□□□□ 0.37
CSMD2Q7Z408 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSMD2Q7Z408 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 AL137013.1-201ENST00000432946 1228 ntBASIC17.38■□□□□ 0.37
CSMD2Q7Z408 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms