Protein–RNA interactions for Protein: Q6PDB4

ZNF880, Zinc finger protein 880, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF880Q6PDB4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 AC105265.2-201ENST00000467189 838 ntBASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 AC005837.3-201ENST00000612163 286 ntBASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 AC120498.10-201ENST00000621827 505 ntBASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF880Q6PDB4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 LINC02228-203ENST00000641970 1355 ntBASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
ZNF880Q6PDB4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 DUX4L2-201ENST00000561772 1275 ntBASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 DUX4L6-201ENST00000626483 1275 ntBASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 DUX4L1-201ENST00000627662 1275 ntBASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 DUX4L8-201ENST00000629013 1275 ntBASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 DUX4L3-201ENST00000630187 1275 ntBASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 DUX4L7-201ENST00000630678 1275 ntBASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 DUX4L5-201ENST00000630834 1275 ntBASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF880Q6PDB4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF880Q6PDB4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF880Q6PDB4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF880Q6PDB4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF880Q6PDB4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNF880Q6PDB4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.08■□□□□ 0.33
ZNF880Q6PDB4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 AC092720.2-201ENST00000602388 1665 ntBASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 AC123595.1-201ENST00000440769 1046 ntBASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 MIR2861-201ENST00000636310 90 ntBASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNF880Q6PDB4 AC116050.2-201ENST00000612102 1779 ntBASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF880Q6PDB4 AC099778.1-201ENST00000568593 1911 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms