Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC38Q5VT99 KRT8P36-201ENST00000489121 1440 ntBASIC21.28■■□□□ 1
LRRC38Q5VT99 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC38Q5VT99 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC38Q5VT99 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC38Q5VT99 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC38Q5VT99 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.27■■□□□ 1
LRRC38Q5VT99 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC38Q5VT99 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC38Q5VT99 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC38Q5VT99 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC38Q5VT99 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.27■■□□□ 1
LRRC38Q5VT99 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC38Q5VT99 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRRC38Q5VT99 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.27■■□□□ 1
LRRC38Q5VT99 MIR6821-201ENST00000617625 74 ntBASIC21.27■■□□□ 1
LRRC38Q5VT99 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRRC38Q5VT99 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC38Q5VT99 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.27■■□□□ 1
LRRC38Q5VT99 AC099778.1-201ENST00000568593 1911 ntBASIC21.27■■□□□ 1
LRRC38Q5VT99 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LRRC38Q5VT99 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
LRRC38Q5VT99 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
LRRC38Q5VT99 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
LRRC38Q5VT99 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 FAM21FP-204ENST00000608637 956 ntBASIC21.26■□□□□ 0.99
LRRC38Q5VT99 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.26■□□□□ 0.99
LRRC38Q5VT99 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC38Q5VT99 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.24■□□□□ 0.99
LRRC38Q5VT99 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
LRRC38Q5VT99 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC38Q5VT99 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC38Q5VT99 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC38Q5VT99 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.23■□□□□ 0.99
LRRC38Q5VT99 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.23■□□□□ 0.99
LRRC38Q5VT99 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms