Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.68■□□□□ 0.9
CDH17Q12864 RARRES2P6-201ENST00000567333 442 ntBASIC20.68■□□□□ 0.9
CDH17Q12864 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH17Q12864 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH17Q12864 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CDH17Q12864 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH17Q12864 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH17Q12864 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH17Q12864 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CDH17Q12864 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH17Q12864 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDH17Q12864 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH17Q12864 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH17Q12864 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH17Q12864 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH17Q12864 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CDH17Q12864 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH17Q12864 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH17Q12864 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH17Q12864 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH17Q12864 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.67■□□□□ 0.9
CDH17Q12864 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CDH17Q12864 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.67■□□□□ 0.9
CDH17Q12864 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH17Q12864 AC010536.3-201ENST00000620306 533 ntBASIC20.67■□□□□ 0.9
CDH17Q12864 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CDH17Q12864 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CDH17Q12864 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH17Q12864 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH17Q12864 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDH17Q12864 AC092720.2-201ENST00000602388 1665 ntBASIC20.67■□□□□ 0.9
CDH17Q12864 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH17Q12864 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH17Q12864 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH17Q12864 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH17Q12864 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH17Q12864 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH17Q12864 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH17Q12864 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH17Q12864 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
CDH17Q12864 TERF1P5-201ENST00000477545 1207 ntBASIC20.66■□□□□ 0.9
CDH17Q12864 AC137761.2-201ENST00000561729 223 ntBASIC20.66■□□□□ 0.9
CDH17Q12864 AC145350.3-201ENST00000569033 163 ntBASIC20.66■□□□□ 0.9
CDH17Q12864 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH17Q12864 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH17Q12864 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH17Q12864 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH17Q12864 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH17Q12864 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDH17Q12864 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH17Q12864 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH17Q12864 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH17Q12864 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDH17Q12864 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH17Q12864 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.65■□□□□ 0.9
CDH17Q12864 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDH17Q12864 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH17Q12864 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.65■□□□□ 0.9
CDH17Q12864 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH17Q12864 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.65■□□□□ 0.9
CDH17Q12864 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.65■□□□□ 0.9
CDH17Q12864 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.65■□□□□ 0.9
CDH17Q12864 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH17Q12864 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH17Q12864 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.65■□□□□ 0.9
CDH17Q12864 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH17Q12864 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH17Q12864 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.65■□□□□ 0.9
CDH17Q12864 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH17Q12864 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.65■□□□□ 0.9
CDH17Q12864 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH17Q12864 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH17Q12864 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH17Q12864 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH17Q12864 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDH17Q12864 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.64■□□□□ 0.9
CDH17Q12864 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDH17Q12864 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.64■□□□□ 0.89
CDH17Q12864 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH17Q12864 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH17Q12864 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.64■□□□□ 0.89
CDH17Q12864 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CDH17Q12864 FAM21FP-204ENST00000608637 956 ntBASIC20.64■□□□□ 0.89
CDH17Q12864 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.64■□□□□ 0.89
CDH17Q12864 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH17Q12864 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDH17Q12864 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH17Q12864 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CDH17Q12864 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.89
CDH17Q12864 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.64■□□□□ 0.89
CDH17Q12864 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH17Q12864 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CDH17Q12864 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH17Q12864 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDH17Q12864 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH17Q12864 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH17Q12864 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH17Q12864 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CDH17Q12864 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.63■□□□□ 0.89
CDH17Q12864 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms