Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 YBR197CYBR197C 654 nt2.53□□□□□ -2
VPS38Q05919 UTP13YLR222C 2454 nt2.52□□□□□ -2.01
VPS38Q05919 RLI1YDR091C 1827 nt2.52□□□□□ -2.01
VPS38Q05919 HYP2YEL034W 474 nt2.52□□□□□ -2.01
VPS38Q05919 YAP3YHL009C 993 nt2.52□□□□□ -2.01
VPS38Q05919 YIL030W-AYIL030W-A 339 nt2.52□□□□□ -2.01
VPS38Q05919 YIL058WYIL058W 285 nt2.52□□□□□ -2.01
VPS38Q05919 PEP8YJL053W 1140 nt2.52□□□□□ -2.01
VPS38Q05919 YJL202CYJL202C 348 nt2.52□□□□□ -2.01
VPS38Q05919 FYV7YLR068W 456 nt2.52□□□□□ -2.01
VPS38Q05919 RPS1AYLR441C 768 nt2.52□□□□□ -2.01
VPS38Q05919 RPB11YOL005C 363 nt2.52□□□□□ -2.01
VPS38Q05919 YPL039WYPL039W 951 nt2.52□□□□□ -2.01
VPS38Q05919 NEW1YPL226W 3591 nt2.52□□□□□ -2.01
VPS38Q05919 YIL080WYIL080W 4722 nt2.52□□□□□ -2.01
VPS38Q05919 DNF1YER166W 4716 nt2.51□□□□□ -2.01
VPS38Q05919 GPI8YDR331W 1236 nt2.51□□□□□ -2.01
VPS38Q05919 IRC4YDR540C 540 nt2.51□□□□□ -2.01
VPS38Q05919 MXR1YER042W 555 nt2.51□□□□□ -2.01
VPS38Q05919 YAL059C-AYAL059C-A 423 nt2.51□□□□□ -2.01
VPS38Q05919 PBI2YNL015W 228 nt2.51□□□□□ -2.01
VPS38Q05919 GPI15YNL038W 690 nt2.51□□□□□ -2.01
VPS38Q05919 YPR145C-AYPR145C-A 237 nt2.51□□□□□ -2.01
VPS38Q05919 SWR1YDR334W 4545 nt2.51□□□□□ -2.01
VPS38Q05919 SMC6YLR383W 3345 nt2.5□□□□□ -2.01
VPS38Q05919 MDM32YOR147W 1869 nt2.5□□□□□ -2.01
VPS38Q05919 ORC2YBR060C 1863 nt2.5□□□□□ -2.01
VPS38Q05919 SIR3YLR442C 2937 nt2.5□□□□□ -2.01
VPS38Q05919 YEL030C-AYEL030C-A 315 nt2.5□□□□□ -2.01
VPS38Q05919 GET1YGL020C 708 nt2.5□□□□□ -2.01
VPS38Q05919 YGL165CYGL165C 579 nt2.5□□□□□ -2.01
VPS38Q05919 YGR018CYGR018C 330 nt2.5□□□□□ -2.01
VPS38Q05919 HYR1YIR037W 492 nt2.5□□□□□ -2.01
VPS38Q05919 CTK3YML112W 891 nt2.5□□□□□ -2.01
VPS38Q05919 RPL25YOL127W 429 nt2.5□□□□□ -2.01
VPS38Q05919 ATX2YOR079C 942 nt2.5□□□□□ -2.01
VPS38Q05919 HRD3YLR207W 2502 nt2.5□□□□□ -2.01
VPS38Q05919 YPR089WYPR089W 2667 nt2.5□□□□□ -2.01
VPS38Q05919 ASG1YIL130W 2895 nt2.5□□□□□ -2.01
VPS38Q05919 AMS1YGL156W 3252 nt2.49□□□□□ -2.01
VPS38Q05919 YCR001WYCR001W 315 nt2.49□□□□□ -2.01
VPS38Q05919 RNR4YGR180C 1038 nt2.49□□□□□ -2.01
VPS38Q05919 YHR130CYHR130C 336 nt2.49□□□□□ -2.01
VPS38Q05919 YKL068W-AYKL068W-A 237 nt2.49□□□□□ -2.01
VPS38Q05919 RPL37AYLR185W 267 nt2.49□□□□□ -2.01
VPS38Q05919 JIP5YPR169W 1479 nt2.49□□□□□ -2.01
VPS38Q05919 PRP6YBR055C 2700 nt2.49□□□□□ -2.01
VPS38Q05919 ROY1YMR258C 1662 nt2.49□□□□□ -2.01
VPS38Q05919 IRC8YJL051W 2469 nt2.49□□□□□ -2.01
VPS38Q05919 RVS161YCR009C 798 nt2.48□□□□□ -2.01
VPS38Q05919 YGR050CYGR050C 357 nt2.48□□□□□ -2.01
VPS38Q05919 RPF1YHR088W 888 nt2.48□□□□□ -2.01
VPS38Q05919 URA10YMR271C 684 nt2.48□□□□□ -2.01
VPS38Q05919 PEX17YNL214W 600 nt2.48□□□□□ -2.01
VPS38Q05919 IRC16YPR038W 360 nt2.48□□□□□ -2.01
VPS38Q05919 TFC3YAL001C 3483 nt2.48□□□□□ -2.01
VPS38Q05919 PDR3YBL005W 2931 nt2.48□□□□□ -2.01
VPS38Q05919 KSP1YHR082C 3090 nt2.47□□□□□ -2.01
VPS38Q05919 FAR11YNL127W 2862 nt2.47□□□□□ -2.01
VPS38Q05919 RPS29AYLR388W 171 nt2.47□□□□□ -2.01
VPS38Q05919 YPL197CYPL197C 414 nt2.47□□□□□ -2.01
VPS38Q05919 YBR076C-AYBR076C-A 267 nt2.47□□□□□ -2.01
VPS38Q05919 INP51YIL002C 2841 nt2.47□□□□□ -2.01
VPS38Q05919 KRE33YNL132W 3171 nt2.46□□□□□ -2.02
VPS38Q05919 ASM4YDL088C 1587 nt2.46□□□□□ -2.02
VPS38Q05919 PSD2YGR170W 3417 nt2.46□□□□□ -2.02
VPS38Q05919 BNA7YDR428C 786 nt2.46□□□□□ -2.02
VPS38Q05919 COX13YGL191W 390 nt2.46□□□□□ -2.02
VPS38Q05919 RAM2YKL019W 951 nt2.46□□□□□ -2.02
VPS38Q05919 YLR458WYLR458W 381 nt2.46□□□□□ -2.02
VPS38Q05919 SPC29YPL124W 762 nt2.46□□□□□ -2.02
VPS38Q05919 MGR1YCL044C 1254 nt2.46□□□□□ -2.02
VPS38Q05919 BRO1YPL084W 2535 nt2.46□□□□□ -2.02
VPS38Q05919 SSD1YDR293C 3753 nt2.46□□□□□ -2.02
VPS38Q05919 YOR192C-AYOR192C-A 1317 nt2.45□□□□□ -2.02
VPS38Q05919 SAK1YER129W 3429 nt2.45□□□□□ -2.02
VPS38Q05919 HOS4YIL112W 3252 nt2.45□□□□□ -2.02
VPS38Q05919 PES4YFR023W 1836 nt2.45□□□□□ -2.02
VPS38Q05919 YHR214C-CYHR214C-C 1437 nt2.45□□□□□ -2.02
VPS38Q05919 YEL018C-AYEL018C-A 534 nt2.45□□□□□ -2.02
VPS38Q05919 AAD16YFL057C 459 nt2.45□□□□□ -2.02
VPS38Q05919 VAR1Q0140 1197 nt2.45□□□□□ -2.02
VPS38Q05919 YPS5YGL259W 498 nt2.45□□□□□ -2.02
VPS38Q05919 ACB1YGR037C 264 nt2.45□□□□□ -2.02
VPS38Q05919 YJL007CYJL007C 315 nt2.45□□□□□ -2.02
VPS38Q05919 YJL127C-BYJL127C-B 159 nt2.45□□□□□ -2.02
VPS38Q05919 PKR1YMR123W 369 nt2.45□□□□□ -2.02
VPS38Q05919 YOR105WYOR105W 327 nt2.45□□□□□ -2.02
VPS38Q05919 SAP185YJL098W 3177 nt2.45□□□□□ -2.02
VPS38Q05919 PHO2YDL106C 1680 nt2.44□□□□□ -2.02
VPS38Q05919 SPE1YKL184W 1401 nt2.44□□□□□ -2.02
VPS38Q05919 SSY1YDR160W 2559 nt2.44□□□□□ -2.02
VPS38Q05919 YER084W-AYER084W-A 513 nt2.44□□□□□ -2.02
VPS38Q05919 YER119C-AYER119C-A 372 nt2.44□□□□□ -2.02
VPS38Q05919 BIG1YHR101C 1008 nt2.44□□□□□ -2.02
VPS38Q05919 RPL40AYIL148W 387 nt2.44□□□□□ -2.02
VPS38Q05919 YLR222C-AYLR222C-A 231 nt2.44□□□□□ -2.02
VPS38Q05919 SYM1YLR251W 594 nt2.44□□□□□ -2.02
VPS38Q05919 RPS7BYNL096C 573 nt2.44□□□□□ -2.02
VPS38Q05919 DAD3YBR233W-A 285 nt2.44□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 30.6 ms