Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC26.32■■□□□ 1.8
EIF4A1P60842 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
EIF4A1P60842 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC26.32■■□□□ 1.8
EIF4A1P60842 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
EIF4A1P60842 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC26.32■■□□□ 1.8
EIF4A1P60842 OR2A1-AS1-207ENST00000486094 819 ntBASIC26.32■■□□□ 1.8
EIF4A1P60842 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.32■■□□□ 1.8
EIF4A1P60842 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
EIF4A1P60842 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.32■■□□□ 1.8
EIF4A1P60842 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.32■■□□□ 1.8
EIF4A1P60842 SOX15-203ENST00000570788 1093 ntBASIC26.32■■□□□ 1.8
EIF4A1P60842 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
EIF4A1P60842 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC26.32■■□□□ 1.8
EIF4A1P60842 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
EIF4A1P60842 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
EIF4A1P60842 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
EIF4A1P60842 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
EIF4A1P60842 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
EIF4A1P60842 LINC00565-201ENST00000562710 2331 ntBASIC26.31■■□□□ 1.8
EIF4A1P60842 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
EIF4A1P60842 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
EIF4A1P60842 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
EIF4A1P60842 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC26.31■■□□□ 1.8
EIF4A1P60842 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.31■■□□□ 1.8
EIF4A1P60842 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
EIF4A1P60842 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
EIF4A1P60842 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
EIF4A1P60842 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
EIF4A1P60842 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
EIF4A1P60842 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
EIF4A1P60842 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
EIF4A1P60842 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
EIF4A1P60842 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.3■■□□□ 1.8
EIF4A1P60842 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
EIF4A1P60842 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
EIF4A1P60842 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC26.3■■□□□ 1.8
EIF4A1P60842 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
EIF4A1P60842 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.3■■□□□ 1.8
EIF4A1P60842 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC26.3■■□□□ 1.8
EIF4A1P60842 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.3■■□□□ 1.8
EIF4A1P60842 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
EIF4A1P60842 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
EIF4A1P60842 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.3■■□□□ 1.8
EIF4A1P60842 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
EIF4A1P60842 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
EIF4A1P60842 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
EIF4A1P60842 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.29■■□□□ 1.8
EIF4A1P60842 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC26.29■■□□□ 1.8
EIF4A1P60842 AC233263.1-201ENST00000578059 224 ntBASIC26.29■■□□□ 1.8
EIF4A1P60842 MIR2861-201ENST00000636310 90 ntBASIC26.29■■□□□ 1.8
EIF4A1P60842 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.29■■□□□ 1.8
EIF4A1P60842 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
EIF4A1P60842 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
EIF4A1P60842 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
EIF4A1P60842 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
EIF4A1P60842 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC26.29■■□□□ 1.8
EIF4A1P60842 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
EIF4A1P60842 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
EIF4A1P60842 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
EIF4A1P60842 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
EIF4A1P60842 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
EIF4A1P60842 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
EIF4A1P60842 AC121338.2-201ENST00000622535 1744 ntBASIC26.28■■□□□ 1.8
EIF4A1P60842 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
EIF4A1P60842 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
EIF4A1P60842 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
EIF4A1P60842 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
EIF4A1P60842 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
EIF4A1P60842 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
EIF4A1P60842 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
EIF4A1P60842 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
EIF4A1P60842 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
EIF4A1P60842 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
EIF4A1P60842 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
EIF4A1P60842 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
EIF4A1P60842 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
EIF4A1P60842 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.27■■□□□ 1.8
EIF4A1P60842 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
EIF4A1P60842 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
EIF4A1P60842 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
EIF4A1P60842 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
EIF4A1P60842 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
EIF4A1P60842 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC26.27■■□□□ 1.8
EIF4A1P60842 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
EIF4A1P60842 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC26.27■■□□□ 1.8
EIF4A1P60842 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
EIF4A1P60842 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
EIF4A1P60842 AC142381.4-202ENST00000563973 229 ntBASIC26.27■■□□□ 1.8
EIF4A1P60842 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC26.27■■□□□ 1.8
EIF4A1P60842 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
EIF4A1P60842 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
EIF4A1P60842 AF106564.1-201ENST00000607058 2553 ntBASIC26.27■■□□□ 1.8
EIF4A1P60842 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
EIF4A1P60842 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
EIF4A1P60842 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC26.26■■□□□ 1.79
EIF4A1P60842 KRT8P36-201ENST00000489121 1440 ntBASIC26.26■■□□□ 1.79
EIF4A1P60842 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.26■■□□□ 1.79
EIF4A1P60842 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.26■■□□□ 1.79
EIF4A1P60842 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.26■■□□□ 1.79
EIF4A1P60842 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms