Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 AP001412.1-201ENST00000608405 714 ntBASIC18.37■□□□□ 0.53
CASP6P55212 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.37■□□□□ 0.53
CASP6P55212 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASP6P55212 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.37■□□□□ 0.53
CASP6P55212 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASP6P55212 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CASP6P55212 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASP6P55212 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASP6P55212 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASP6P55212 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASP6P55212 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASP6P55212 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASP6P55212 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASP6P55212 AC010542.4-201ENST00000563151 1910 ntBASIC18.37■□□□□ 0.53
CASP6P55212 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.37■□□□□ 0.53
CASP6P55212 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CASP6P55212 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.37■□□□□ 0.53
CASP6P55212 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CASP6P55212 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CASP6P55212 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASP6P55212 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
CASP6P55212 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASP6P55212 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASP6P55212 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CASP6P55212 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CASP6P55212 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CASP6P55212 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CASP6P55212 SNORA78-201ENST00000459373 127 ntBASIC18.36■□□□□ 0.53
CASP6P55212 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.36■□□□□ 0.53
CASP6P55212 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASP6P55212 C2orf69P4-201ENST00000565394 541 ntBASIC18.36■□□□□ 0.53
CASP6P55212 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.36■□□□□ 0.53
CASP6P55212 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.36■□□□□ 0.53
CASP6P55212 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASP6P55212 AC127496.7-201ENST00000625110 1798 ntBASIC18.36■□□□□ 0.53
CASP6P55212 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CASP6P55212 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASP6P55212 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASP6P55212 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASP6P55212 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.36■□□□□ 0.53
CASP6P55212 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.35■□□□□ 0.53
CASP6P55212 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.35■□□□□ 0.53
CASP6P55212 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.35■□□□□ 0.53
CASP6P55212 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.35■□□□□ 0.53
CASP6P55212 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.35■□□□□ 0.53
CASP6P55212 AL390719.1-204ENST00000412397 1219 ntBASIC18.35■□□□□ 0.53
CASP6P55212 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.35■□□□□ 0.53
CASP6P55212 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.35■□□□□ 0.53
CASP6P55212 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CASP6P55212 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.35■□□□□ 0.53
CASP6P55212 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.35■□□□□ 0.53
CASP6P55212 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
CASP6P55212 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASP6P55212 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.34■□□□□ 0.53
CASP6P55212 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASP6P55212 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASP6P55212 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASP6P55212 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASP6P55212 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CASP6P55212 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.34■□□□□ 0.53
CASP6P55212 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CASP6P55212 AC068473.5-201ENST00000616428 2072 ntBASIC18.34■□□□□ 0.53
CASP6P55212 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASP6P55212 KRT17P2-201ENST00000300992 1314 ntBASIC18.34■□□□□ 0.53
CASP6P55212 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASP6P55212 C9orf163-202ENST00000624034 2573 ntBASIC18.34■□□□□ 0.53
CASP6P55212 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASP6P55212 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.34■□□□□ 0.53
CASP6P55212 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASP6P55212 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.34■□□□□ 0.53
CASP6P55212 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.34■□□□□ 0.53
CASP6P55212 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CASP6P55212 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.34■□□□□ 0.53
CASP6P55212 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.34■□□□□ 0.53
CASP6P55212 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
CASP6P55212 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASP6P55212 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CASP6P55212 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CASP6P55212 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.33■□□□□ 0.53
CASP6P55212 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.33■□□□□ 0.52
CASP6P55212 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CASP6P55212 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms