Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDX1P52945 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDX1P52945 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.88■□□□□ 0.77
PDX1P52945 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDX1P52945 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PDX1P52945 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDX1P52945 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.88■□□□□ 0.77
PDX1P52945 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDX1P52945 AC008550.1-201ENST00000511500 884 ntBASIC19.88■□□□□ 0.77
PDX1P52945 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.88■□□□□ 0.77
PDX1P52945 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.88■□□□□ 0.77
PDX1P52945 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.88■□□□□ 0.77
PDX1P52945 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.88■□□□□ 0.77
PDX1P52945 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDX1P52945 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDX1P52945 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDX1P52945 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PDX1P52945 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDX1P52945 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.88■□□□□ 0.77
PDX1P52945 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.88■□□□□ 0.77
PDX1P52945 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDX1P52945 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PDX1P52945 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDX1P52945 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDX1P52945 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDX1P52945 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.87■□□□□ 0.77
PDX1P52945 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDX1P52945 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.87■□□□□ 0.77
PDX1P52945 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.87■□□□□ 0.77
PDX1P52945 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDX1P52945 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDX1P52945 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.87■□□□□ 0.77
PDX1P52945 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
PDX1P52945 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.87■□□□□ 0.77
PDX1P52945 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PDX1P52945 AC026310.3-201ENST00000625186 2373 ntBASIC19.87■□□□□ 0.77
PDX1P52945 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDX1P52945 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDX1P52945 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.86■□□□□ 0.77
PDX1P52945 AL137060.1-201ENST00000618151 2648 ntBASIC19.86■□□□□ 0.77
PDX1P52945 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDX1P52945 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.86■□□□□ 0.77
PDX1P52945 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDX1P52945 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.86■□□□□ 0.77
PDX1P52945 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDX1P52945 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDX1P52945 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDX1P52945 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
PDX1P52945 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDX1P52945 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDX1P52945 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDX1P52945 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDX1P52945 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDX1P52945 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.85■□□□□ 0.77
PDX1P52945 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDX1P52945 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDX1P52945 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDX1P52945 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDX1P52945 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDX1P52945 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDX1P52945 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDX1P52945 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
PDX1P52945 KRT18P68-201ENST00000392293 1000 ntBASIC19.85■□□□□ 0.77
PDX1P52945 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.85■□□□□ 0.77
PDX1P52945 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.85■□□□□ 0.77
PDX1P52945 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.85■□□□□ 0.77
PDX1P52945 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.85■□□□□ 0.77
PDX1P52945 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.85■□□□□ 0.77
PDX1P52945 AC233263.1-201ENST00000578059 224 ntBASIC19.85■□□□□ 0.77
PDX1P52945 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
PDX1P52945 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDX1P52945 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PDX1P52945 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.85■□□□□ 0.77
PDX1P52945 AC092368.3-202ENST00000574180 1591 ntBASIC19.85■□□□□ 0.77
PDX1P52945 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDX1P52945 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.85■□□□□ 0.77
PDX1P52945 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PDX1P52945 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.84■□□□□ 0.77
PDX1P52945 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.84■□□□□ 0.77
PDX1P52945 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.84■□□□□ 0.77
PDX1P52945 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDX1P52945 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PDX1P52945 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDX1P52945 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDX1P52945 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDX1P52945 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PDX1P52945 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDX1P52945 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDX1P52945 AC007322.3-201ENST00000426526 701 ntBASIC19.84■□□□□ 0.77
PDX1P52945 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.84■□□□□ 0.77
PDX1P52945 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.84■□□□□ 0.77
PDX1P52945 UBE2SP1-201ENST00000450587 669 ntBASIC19.84■□□□□ 0.77
PDX1P52945 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.84■□□□□ 0.77
PDX1P52945 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.84■□□□□ 0.77
PDX1P52945 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.84■□□□□ 0.77
PDX1P52945 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.84■□□□□ 0.77
PDX1P52945 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDX1P52945 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.84■□□□□ 0.77
PDX1P52945 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.84■□□□□ 0.77
PDX1P52945 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms