Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.33■□□□□ 0.68
CLK3P49761 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.33■□□□□ 0.68
CLK3P49761 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.33■□□□□ 0.68
CLK3P49761 POU5F1P4-201ENST00000413175 1085 ntBASIC19.33■□□□□ 0.68
CLK3P49761 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.33■□□□□ 0.68
CLK3P49761 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLK3P49761 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.33■□□□□ 0.68
CLK3P49761 AC138907.5-202ENST00000569484 235 ntBASIC19.33■□□□□ 0.68
CLK3P49761 AC104187.1-201ENST00000607510 612 ntBASIC19.33■□□□□ 0.68
CLK3P49761 AP004607.4-201ENST00000530158 1459 ntBASIC19.33■□□□□ 0.68
CLK3P49761 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLK3P49761 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLK3P49761 AC004854.2-201ENST00000608450 1441 ntBASIC19.33■□□□□ 0.68
CLK3P49761 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
CLK3P49761 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.33■□□□□ 0.68
CLK3P49761 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLK3P49761 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.32■□□□□ 0.68
CLK3P49761 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLK3P49761 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLK3P49761 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.32■□□□□ 0.68
CLK3P49761 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.32■□□□□ 0.68
CLK3P49761 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLK3P49761 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLK3P49761 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.32■□□□□ 0.68
CLK3P49761 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.32■□□□□ 0.68
CLK3P49761 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLK3P49761 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLK3P49761 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLK3P49761 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLK3P49761 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLK3P49761 PCDHAC2-203ENST00000615316 3011 ntBASIC19.32■□□□□ 0.68
CLK3P49761 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLK3P49761 PLK5-205ENST00000642079 1969 ntBASIC19.32■□□□□ 0.68
CLK3P49761 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CLK3P49761 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLK3P49761 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.31■□□□□ 0.68
CLK3P49761 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLK3P49761 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLK3P49761 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.31■□□□□ 0.68
CLK3P49761 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.31■□□□□ 0.68
CLK3P49761 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CLK3P49761 AIRN-201ENST00000601203 4374 ntBASIC19.31■□□□□ 0.68
CLK3P49761 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLK3P49761 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CLK3P49761 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLK3P49761 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLK3P49761 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.31■□□□□ 0.68
CLK3P49761 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.31■□□□□ 0.68
CLK3P49761 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.31■□□□□ 0.68
CLK3P49761 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CLK3P49761 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CLK3P49761 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLK3P49761 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLK3P49761 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.31■□□□□ 0.68
CLK3P49761 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.31■□□□□ 0.68
CLK3P49761 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.31■□□□□ 0.68
CLK3P49761 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.31■□□□□ 0.68
CLK3P49761 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLK3P49761 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CLK3P49761 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
CLK3P49761 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLK3P49761 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CLK3P49761 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK3P49761 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CLK3P49761 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK3P49761 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK3P49761 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.3■□□□□ 0.68
CLK3P49761 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK3P49761 AC010141.2-201ENST00000452426 721 ntBASIC19.3■□□□□ 0.68
CLK3P49761 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.3■□□□□ 0.68
CLK3P49761 AP001160.3-201ENST00000601484 763 ntBASIC19.3■□□□□ 0.68
CLK3P49761 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CLK3P49761 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK3P49761 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLK3P49761 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CLK3P49761 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK3P49761 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK3P49761 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLK3P49761 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.3■□□□□ 0.68
CLK3P49761 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.3■□□□□ 0.68
CLK3P49761 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CLK3P49761 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLK3P49761 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLK3P49761 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.29■□□□□ 0.68
CLK3P49761 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CLK3P49761 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.29■□□□□ 0.68
CLK3P49761 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLK3P49761 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLK3P49761 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLK3P49761 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.29■□□□□ 0.68
CLK3P49761 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLK3P49761 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLK3P49761 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.29■□□□□ 0.68
CLK3P49761 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.29■□□□□ 0.68
CLK3P49761 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.29■□□□□ 0.68
CLK3P49761 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLK3P49761 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.29■□□□□ 0.68
CLK3P49761 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.29■□□□□ 0.68
CLK3P49761 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.29■□□□□ 0.68
CLK3P49761 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms