Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YPL080CYPL080C 327 nt2.32□□□□□ -2.04
SSN8P47821 TRM7YBR061C 933 nt2.32□□□□□ -2.04
SSN8P47821 RLF2YPR018W 1821 nt2.32□□□□□ -2.04
SSN8P47821 ORC1YML065W 2745 nt2.32□□□□□ -2.04
SSN8P47821 DNL4YOR005C 2835 nt2.32□□□□□ -2.04
SSN8P47821 RTR2YDR066C 591 nt2.31□□□□□ -2.04
SSN8P47821 YGR042WYGR042W 816 nt2.31□□□□□ -2.04
SSN8P47821 RPL36AYMR194W 303 nt2.31□□□□□ -2.04
SSN8P47821 YPL039WYPL039W 951 nt2.31□□□□□ -2.04
SSN8P47821 YHR214C-CYHR214C-C 1437 nt2.31□□□□□ -2.04
SSN8P47821 UTP13YLR222C 2454 nt2.31□□□□□ -2.04
SSN8P47821 ASG1YIL130W 2895 nt2.3□□□□□ -2.04
SSN8P47821 YER119C-AYER119C-A 372 nt2.3□□□□□ -2.04
SSN8P47821 GET1YGL020C 708 nt2.3□□□□□ -2.04
SSN8P47821 YJR023CYJR023C 402 nt2.3□□□□□ -2.04
SSN8P47821 CMS1YLR003C 876 nt2.3□□□□□ -2.04
SSN8P47821 RPS1AYLR441C 768 nt2.3□□□□□ -2.04
SSN8P47821 COX14YML129C 213 nt2.3□□□□□ -2.04
SSN8P47821 PRM3YPL192C 402 nt2.3□□□□□ -2.04
SSN8P47821 GPI17YDR434W 1605 nt2.3□□□□□ -2.04
SSN8P47821 YHR078WYHR078W 1659 nt2.3□□□□□ -2.04
SSN8P47821 SDC25YLL016W 3147 nt2.3□□□□□ -2.04
SSN8P47821 RPO41YFL036W 4056 nt2.3□□□□□ -2.04
SSN8P47821 TRS130YMR218C 3309 nt2.29□□□□□ -2.04
SSN8P47821 YPL150WYPL150W 2706 nt2.29□□□□□ -2.04
SSN8P47821 BNI1YNL271C 5862 nt2.29□□□□□ -2.04
SSN8P47821 ROY1YMR258C 1662 nt2.29□□□□□ -2.04
SSN8P47821 ECM5YMR176W 4236 nt2.29□□□□□ -2.04
SSN8P47821 snR76snR76 109 nt2.29□□□□□ -2.04
SSN8P47821 RPL27BYDR471W 411 nt2.29□□□□□ -2.04
SSN8P47821 YEL018C-AYEL018C-A 534 nt2.29□□□□□ -2.04
SSN8P47821 BIG1YHR101C 1008 nt2.29□□□□□ -2.04
SSN8P47821 TPM2YIL138C 486 nt2.29□□□□□ -2.04
SSN8P47821 SPC1YJR010C-A 285 nt2.29□□□□□ -2.04
SSN8P47821 YLR269CYLR269C 351 nt2.29□□□□□ -2.04
SSN8P47821 YML108WYML108W 318 nt2.29□□□□□ -2.04
SSN8P47821 SAS2YMR127C 1017 nt2.29□□□□□ -2.04
SSN8P47821 MSS18YPR134W 807 nt2.29□□□□□ -2.04
SSN8P47821 SEC26YDR238C 2922 nt2.29□□□□□ -2.04
SSN8P47821 STH1YIL126W 4080 nt2.28□□□□□ -2.04
SSN8P47821 NDD1YOR372C 1665 nt2.28□□□□□ -2.04
SSN8P47821 YFH1YDL120W 525 nt2.28□□□□□ -2.04
SSN8P47821 YRB1YDR002W 606 nt2.28□□□□□ -2.04
SSN8P47821 PEX4YGR133W 552 nt2.28□□□□□ -2.04
SSN8P47821 LAG1YHL003C 1236 nt2.28□□□□□ -2.04
SSN8P47821 HYR1YIR037W 492 nt2.28□□□□□ -2.04
SSN8P47821 URA10YMR271C 684 nt2.28□□□□□ -2.04
SSN8P47821 CMC2YBL059C-A 330 nt2.28□□□□□ -2.04
SSN8P47821 NOP15YNL110C 663 nt2.28□□□□□ -2.04
SSN8P47821 RPB11YOL005C 363 nt2.28□□□□□ -2.04
SSN8P47821 YPL197CYPL197C 414 nt2.28□□□□□ -2.04
SSN8P47821 YPR145C-AYPR145C-A 237 nt2.28□□□□□ -2.04
SSN8P47821 VMA9YCL005W-A 222 nt2.28□□□□□ -2.04
SSN8P47821 PSO2YMR137C 1986 nt2.28□□□□□ -2.04
SSN8P47821 NAB3YPL190C 2409 nt2.28□□□□□ -2.04
SSN8P47821 SSE1YPL106C 2082 nt2.27□□□□□ -2.05
SSN8P47821 RGA2YDR379W 3030 nt2.27□□□□□ -2.05
SSN8P47821 SMB1YER029C 591 nt2.27□□□□□ -2.05
SSN8P47821 TIM8YJR135W-A 264 nt2.27□□□□□ -2.05
SSN8P47821 COA4YLR218C 453 nt2.27□□□□□ -2.05
SSN8P47821 TIF11YMR260C 462 nt2.27□□□□□ -2.05
SSN8P47821 CDC33YOL139C 642 nt2.27□□□□□ -2.05
SSN8P47821 CRS5YOR031W 210 nt2.27□□□□□ -2.05
SSN8P47821 EDS1YBR033W 2760 nt2.27□□□□□ -2.05
SSN8P47821 MDM32YOR147W 1869 nt2.26□□□□□ -2.05
SSN8P47821 RNH70YGR276C 1662 nt2.26□□□□□ -2.05
SSN8P47821 HUR1YGL168W 333 nt2.26□□□□□ -2.05
SSN8P47821 YHR139C-AYHR139C-A 312 nt2.26□□□□□ -2.05
SSN8P47821 CRG1YHR209W 876 nt2.26□□□□□ -2.05
SSN8P47821 TEN1YLR010C 483 nt2.26□□□□□ -2.05
SSN8P47821 CAT5YOR125C 702 nt2.26□□□□□ -2.05
SSN8P47821 GIN4YDR507C 3429 nt2.26□□□□□ -2.05
SSN8P47821 AMS1YGL156W 3252 nt2.26□□□□□ -2.05
SSN8P47821 ELG1YOR144C 2376 nt2.25□□□□□ -2.05
SSN8P47821 YDL032WYDL032W 312 nt2.25□□□□□ -2.05
SSN8P47821 YER189WYER189W 369 nt2.25□□□□□ -2.05
SSN8P47821 RPC10YHR143W-A 213 nt2.25□□□□□ -2.05
SSN8P47821 YIL058WYIL058W 285 nt2.25□□□□□ -2.05
SSN8P47821 VPH2YKL119C 648 nt2.25□□□□□ -2.05
SSN8P47821 YMR052C-AYMR052C-A 366 nt2.25□□□□□ -2.05
SSN8P47821 ICY1YMR195W 384 nt2.25□□□□□ -2.05
SSN8P47821 RSA1YPL193W 1146 nt2.25□□□□□ -2.05
SSN8P47821 YBR076C-AYBR076C-A 267 nt2.25□□□□□ -2.05
SSN8P47821 YBR012W-AYBR012W-A 1323 nt2.24□□□□□ -2.05
SSN8P47821 YOR142W-AYOR142W-A 1323 nt2.24□□□□□ -2.05
SSN8P47821 YPR158W-AYPR158W-A 1323 nt2.24□□□□□ -2.05
SSN8P47821 SWA2YDR320C 2007 nt2.24□□□□□ -2.05
SSN8P47821 tC(GCA)BtC(GCA)B 72 nt2.24□□□□□ -2.05
SSN8P47821 tC(GCA)GtC(GCA)G 72 nt2.24□□□□□ -2.05
SSN8P47821 tC(GCA)P1tC(GCA)P1 72 nt2.24□□□□□ -2.05
SSN8P47821 tC(GCA)P2tC(GCA)P2 72 nt2.24□□□□□ -2.05
SSN8P47821 MBB1YJL199C 327 nt2.24□□□□□ -2.05
SSN8P47821 RNP1YLL046C 750 nt2.24□□□□□ -2.05
SSN8P47821 YLR101CYLR101C 396 nt2.24□□□□□ -2.05
SSN8P47821 RMP1YLR145W 606 nt2.24□□□□□ -2.05
SSN8P47821 CCW14YLR390W-A 717 nt2.24□□□□□ -2.05
SSN8P47821 YNL324WYNL324W 396 nt2.24□□□□□ -2.05
SSN8P47821 YOR248WYOR248W 303 nt2.24□□□□□ -2.05
SSN8P47821 MCD1YDL003W 1701 nt2.23□□□□□ -2.05
SSN8P47821 HAA1YPR008W 2085 nt2.23□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 91.7 ms