Protein–RNA interactions for Protein: P39962

YCK3, Casein kinase I homolog 3, yeastyeast

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCK3P39962 KEL2YGR238C 2649 nt5.74□□□□□ -1.49
YCK3P39962 FRE3YOR381W 2136 nt5.74□□□□□ -1.49
YCK3P39962 SVL3YPL032C 2478 nt5.73□□□□□ -1.49
YCK3P39962 FMP16YDR070C 282 nt5.73□□□□□ -1.49
YCK3P39962 NUP82YJL061W 2142 nt5.72□□□□□ -1.49
YCK3P39962 OXP1YKL215C 3861 nt5.72□□□□□ -1.49
YCK3P39962 RSP5YER125W 2430 nt5.72□□□□□ -1.49
YCK3P39962 ECM30YLR436C 3825 nt5.72□□□□□ -1.49
YCK3P39962 SCH9YHR205W 2475 nt5.72□□□□□ -1.49
YCK3P39962 ADE6YGR061C 4077 nt5.72□□□□□ -1.49
YCK3P39962 YLL066CYLL066C 3618 nt5.71□□□□□ -1.5
YCK3P39962 YBR113WYBR113W 483 nt5.71□□□□□ -1.5
YCK3P39962 snR32snR32 188 nt5.71□□□□□ -1.5
YCK3P39962 snR43snR43 209 nt5.71□□□□□ -1.5
YCK3P39962 YTA12YMR089C 2478 nt5.71□□□□□ -1.5
YCK3P39962 EBS1YDR206W 2655 nt5.71□□□□□ -1.5
YCK3P39962 BUD6YLR319C 2367 nt5.7□□□□□ -1.5
YCK3P39962 FOB1YDR110W 1701 nt5.7□□□□□ -1.5
YCK3P39962 NTH2YBR001C 2343 nt5.7□□□□□ -1.5
YCK3P39962 YHR032W-AYHR032W-A 180 nt5.69□□□□□ -1.5
YCK3P39962 IKS1YJL057C 2004 nt5.68□□□□□ -1.5
YCK3P39962 LYP1YNL268W 1836 nt5.67□□□□□ -1.5
YCK3P39962 VMA3YEL027W 483 nt5.67□□□□□ -1.5
YCK3P39962 YLR041WYLR041W 321 nt5.67□□□□□ -1.5
YCK3P39962 FAA1YOR317W 2103 nt5.67□□□□□ -1.5
YCK3P39962 NOP9YJL010C 2001 nt5.67□□□□□ -1.5
YCK3P39962 PIF1YML061C 2580 nt5.66□□□□□ -1.5
YCK3P39962 SWI5YDR146C 2130 nt5.66□□□□□ -1.5
YCK3P39962 BOI2YER114C 3123 nt5.66□□□□□ -1.5
YCK3P39962 IMG1YCR046C 510 nt5.66□□□□□ -1.5
YCK3P39962 YKL225WYKL225W 348 nt5.66□□□□□ -1.5
YCK3P39962 PXA1YPL147W 2613 nt5.66□□□□□ -1.5
YCK3P39962 FLC3YGL139W 2409 nt5.66□□□□□ -1.5
YCK3P39962 SEC15YGL233W 2733 nt5.66□□□□□ -1.5
YCK3P39962 EMW1YNL313C 2715 nt5.65□□□□□ -1.51
YCK3P39962 OSW2YLR054C 2175 nt5.65□□□□□ -1.51
YCK3P39962 YDL206WYDL206W 2289 nt5.64□□□□□ -1.51
YCK3P39962 IRC8YJL051W 2469 nt5.64□□□□□ -1.51
YCK3P39962 FAT1YBR041W 2010 nt5.64□□□□□ -1.51
YCK3P39962 EXO84YBR102C 2262 nt5.63□□□□□ -1.51
YCK3P39962 ROD1YOR018W 2514 nt5.63□□□□□ -1.51
YCK3P39962 SBE22YHR103W 2559 nt5.62□□□□□ -1.51
YCK3P39962 KIP2YPL155C 2121 nt5.62□□□□□ -1.51
YCK3P39962 QCR6YFR033C 444 nt5.61□□□□□ -1.51
YCK3P39962 OAF3YKR064W 2592 nt5.61□□□□□ -1.51
YCK3P39962 UBP10YNL186W 2379 nt5.61□□□□□ -1.51
YCK3P39962 MAK10YEL053C 2202 nt5.6□□□□□ -1.51
YCK3P39962 YHR020WYHR020W 2067 nt5.6□□□□□ -1.51
YCK3P39962 PTP3YER075C 2787 nt5.6□□□□□ -1.51
YCK3P39962 HSP12YFL014W 330 nt5.6□□□□□ -1.51
YCK3P39962 RDN5-2RDN5-2 119 nt5.6□□□□□ -1.51
YCK3P39962 RDN5-3RDN5-3 119 nt5.6□□□□□ -1.51
YCK3P39962 RDN5-4RDN5-4 119 nt5.6□□□□□ -1.51
YCK3P39962 RDN5-5RDN5-5 119 nt5.6□□□□□ -1.51
YCK3P39962 MIP1YOR330C 3765 nt5.6□□□□□ -1.51
YCK3P39962 ADE3YGR204W 2841 nt5.59□□□□□ -1.51
YCK3P39962 TGL4YKR089C 2733 nt5.59□□□□□ -1.51
YCK3P39962 FZO1YBR179C 2568 nt5.59□□□□□ -1.51
YCK3P39962 YDL159W-AYDL159W-A 132 nt5.59□□□□□ -1.51
YCK3P39962 SKI2YLR398C 3864 nt5.59□□□□□ -1.52
YCK3P39962 SEA4YBL104C 3117 nt5.59□□□□□ -1.52
YCK3P39962 MTR10YOR160W 2919 nt5.57□□□□□ -1.52
YCK3P39962 YCR023CYCR023C 1836 nt5.57□□□□□ -1.52
YCK3P39962 YHR182WYHR182W 2358 nt5.56□□□□□ -1.52
YCK3P39962 YCR038W-AYCR038W-A 126 nt5.56□□□□□ -1.52
YCK3P39962 YGL069CYGL069C 465 nt5.56□□□□□ -1.52
YCK3P39962 YOR108C-AYOR108C-A 210 nt5.56□□□□□ -1.52
YCK3P39962 NTE1YML059C 5040 nt5.56□□□□□ -1.52
YCK3P39962 APC4YDR118W 1959 nt5.56□□□□□ -1.52
YCK3P39962 GIS4YML006C 2325 nt5.56□□□□□ -1.52
YCK3P39962 STT3YGL022W 2157 nt5.55□□□□□ -1.52
YCK3P39962 AIM3YBR108W 2844 nt5.55□□□□□ -1.52
YCK3P39962 YJL120WYJL120W 324 nt5.55□□□□□ -1.52
YCK3P39962 CUE4YML101C 354 nt5.55□□□□□ -1.52
YCK3P39962 GPI13YLL031C 3054 nt5.55□□□□□ -1.52
YCK3P39962 YPR108W-AYPR108W-A 213 nt5.54□□□□□ -1.52
YCK3P39962 HBT1YDL223C 3141 nt5.54□□□□□ -1.52
YCK3P39962 RSC1YGR056W 2787 nt5.54□□□□□ -1.52
YCK3P39962 PRY3YJL078C 2646 nt5.53□□□□□ -1.52
YCK3P39962 tG(GCC)BtG(GCC)B 71 nt5.53□□□□□ -1.52
YCK3P39962 SUF16tG(GCC)C 71 nt5.53□□□□□ -1.52
YCK3P39962 tG(GCC)D1tG(GCC)D1 71 nt5.53□□□□□ -1.52
YCK3P39962 tG(GCC)D2tG(GCC)D2 71 nt5.53□□□□□ -1.52
YCK3P39962 tG(GCC)EtG(GCC)E 71 nt5.53□□□□□ -1.52
YCK3P39962 SUF20tG(GCC)F1 71 nt5.53□□□□□ -1.52
YCK3P39962 tG(GCC)F2tG(GCC)F2 71 nt5.53□□□□□ -1.52
YCK3P39962 tG(GCC)G1tG(GCC)G1 71 nt5.53□□□□□ -1.52
YCK3P39962 tG(GCC)G2tG(GCC)G2 71 nt5.53□□□□□ -1.52
YCK3P39962 tG(GCC)J1tG(GCC)J1 71 nt5.53□□□□□ -1.52
YCK3P39962 SUF23tG(GCC)J2 71 nt5.53□□□□□ -1.52
YCK3P39962 tG(GCC)MtG(GCC)M 71 nt5.53□□□□□ -1.52
YCK3P39962 tG(GCC)O1tG(GCC)O1 71 nt5.53□□□□□ -1.52
YCK3P39962 SUF17tG(GCC)O2 71 nt5.53□□□□□ -1.52
YCK3P39962 tG(GCC)P1tG(GCC)P1 71 nt5.53□□□□□ -1.52
YCK3P39962 tG(GCC)P2tG(GCC)P2 71 nt5.53□□□□□ -1.52
YCK3P39962 YIL134C-AYIL134C-A 204 nt5.53□□□□□ -1.52
YCK3P39962 SWC7YLR385C 399 nt5.53□□□□□ -1.52
YCK3P39962 KEL1YHR158C 3495 nt5.53□□□□□ -1.52
YCK3P39962 IOC3YFR013W 2364 nt5.52□□□□□ -1.53
YCK3P39962 LSO2YGR169C-A 279 nt5.52□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 1611.8 ms