Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 IRC4YDR540C 540 nt2.89□□□□□ -1.95
MSH1P25846 YER079C-AYER079C-A 339 nt2.89□□□□□ -1.95
MSH1P25846 HUR1YGL168W 333 nt2.89□□□□□ -1.95
MSH1P25846 YHL009W-AYHL009W-A 1242 nt2.89□□□□□ -1.95
MSH1P25846 YHR125WYHR125W 306 nt2.89□□□□□ -1.95
MSH1P25846 YIL058WYIL058W 285 nt2.89□□□□□ -1.95
MSH1P25846 RPL37AYLR185W 267 nt2.89□□□□□ -1.95
MSH1P25846 JIP3YLR331C 378 nt2.89□□□□□ -1.95
MSH1P25846 YML108WYML108W 318 nt2.89□□□□□ -1.95
MSH1P25846 YMR194C-AYMR194C-A 225 nt2.89□□□□□ -1.95
MSH1P25846 FPR1YNL135C 345 nt2.89□□□□□ -1.95
MSH1P25846 YPL197CYPL197C 414 nt2.89□□□□□ -1.95
MSH1P25846 TPS2YDR074W 2691 nt2.89□□□□□ -1.95
MSH1P25846 ROG1YGL144C 2058 nt2.89□□□□□ -1.95
MSH1P25846 RGA2YDR379W 3030 nt2.89□□□□□ -1.95
MSH1P25846 SUL1YBR294W 2580 nt2.89□□□□□ -1.95
MSH1P25846 GCV2YMR189W 3105 nt2.88□□□□□ -1.95
MSH1P25846 MUD2YKL074C 1584 nt2.88□□□□□ -1.95
MSH1P25846 RPL23BYER117W 414 nt2.88□□□□□ -1.95
MSH1P25846 GET1YGL020C 708 nt2.88□□□□□ -1.95
MSH1P25846 GPI14YJR013W 1212 nt2.88□□□□□ -1.95
MSH1P25846 AIM29YKR074W 468 nt2.88□□□□□ -1.95
MSH1P25846 URA10YMR271C 684 nt2.88□□□□□ -1.95
MSH1P25846 NOP15YNL110C 663 nt2.88□□□□□ -1.95
MSH1P25846 LEU3YLR451W 2661 nt2.87□□□□□ -1.95
MSH1P25846 YKR078WYKR078W 1758 nt2.87□□□□□ -1.95
MSH1P25846 YJR079WYJR079W 330 nt2.87□□□□□ -1.95
MSH1P25846 RMP1YLR145W 606 nt2.87□□□□□ -1.95
MSH1P25846 SMA2YML066C 1110 nt2.87□□□□□ -1.95
MSH1P25846 COX14YML129C 213 nt2.87□□□□□ -1.95
MSH1P25846 snR54snR54 86 nt2.87□□□□□ -1.95
MSH1P25846 YBR012W-AYBR012W-A 1323 nt2.87□□□□□ -1.95
MSH1P25846 YOR142W-AYOR142W-A 1323 nt2.87□□□□□ -1.95
MSH1P25846 YPR158W-AYPR158W-A 1323 nt2.87□□□□□ -1.95
MSH1P25846 BAS1YKR099W 2436 nt2.86□□□□□ -1.95
MSH1P25846 HYR1YIR037W 492 nt2.86□□□□□ -1.95
MSH1P25846 VPH2YKL119C 648 nt2.86□□□□□ -1.95
MSH1P25846 TRM7YBR061C 933 nt2.86□□□□□ -1.95
MSH1P25846 UTP14YML093W 2700 nt2.86□□□□□ -1.95
MSH1P25846 SSE1YPL106C 2082 nt2.86□□□□□ -1.95
MSH1P25846 NAB3YPL190C 2409 nt2.85□□□□□ -1.95
MSH1P25846 SDC25YLL016W 3147 nt2.85□□□□□ -1.95
MSH1P25846 SMB1YER029C 591 nt2.85□□□□□ -1.95
MSH1P25846 BET3YKR068C 582 nt2.85□□□□□ -1.95
MSH1P25846 YOR293C-AYOR293C-A 150 nt2.85□□□□□ -1.95
MSH1P25846 DGK1YOR311C 873 nt2.85□□□□□ -1.95
MSH1P25846 ESC1YMR219W 4977 nt2.85□□□□□ -1.95
MSH1P25846 MRD1YPR112C 2664 nt2.84□□□□□ -1.95
MSH1P25846 GPI8YDR331W 1236 nt2.84□□□□□ -1.95
MSH1P25846 HMF1YER057C 390 nt2.84□□□□□ -1.95
MSH1P25846 YHL046W-AYHL046W-A 327 nt2.84□□□□□ -1.95
MSH1P25846 RNP1YLL046C 750 nt2.84□□□□□ -1.95
MSH1P25846 SIP18YMR175W 240 nt2.84□□□□□ -1.95
MSH1P25846 COQ10YOL008W 624 nt2.84□□□□□ -1.95
MSH1P25846 YER079WYER079W 633 nt2.83□□□□□ -1.96
MSH1P25846 YMR001C-AYMR001C-A 231 nt2.83□□□□□ -1.96
MSH1P25846 YMR153C-AYMR153C-A 336 nt2.83□□□□□ -1.96
MSH1P25846 RPL36AYMR194W 303 nt2.83□□□□□ -1.96
MSH1P25846 YOR105WYOR105W 327 nt2.83□□□□□ -1.96
MSH1P25846 MSS18YPR134W 807 nt2.83□□□□□ -1.96
MSH1P25846 YBR197CYBR197C 654 nt2.83□□□□□ -1.96
MSH1P25846 PSK2YOL045W 3306 nt2.83□□□□□ -1.96
MSH1P25846 ASG1YIL130W 2895 nt2.83□□□□□ -1.96
MSH1P25846 PPN1YDR452W 2025 nt2.83□□□□□ -1.96
MSH1P25846 GIN4YDR507C 3429 nt2.83□□□□□ -1.96
MSH1P25846 BCK1YJL095W 4437 nt2.82□□□□□ -1.96
MSH1P25846 BRO1YPL084W 2535 nt2.82□□□□□ -1.96
MSH1P25846 BNR1YIL159W 4128 nt2.82□□□□□ -1.96
MSH1P25846 YDR269CYDR269C 324 nt2.82□□□□□ -1.96
MSH1P25846 YGL165CYGL165C 579 nt2.82□□□□□ -1.96
MSH1P25846 YKL033W-AYKL033W-A 711 nt2.82□□□□□ -1.96
MSH1P25846 TEN1YLR010C 483 nt2.82□□□□□ -1.96
MSH1P25846 YLR101CYLR101C 396 nt2.82□□□□□ -1.96
MSH1P25846 YLR458WYLR458W 381 nt2.82□□□□□ -1.96
MSH1P25846 RPS7BYNL096C 573 nt2.82□□□□□ -1.96
MSH1P25846 CRS5YOR031W 210 nt2.82□□□□□ -1.96
MSH1P25846 YOR248WYOR248W 303 nt2.82□□□□□ -1.96
MSH1P25846 RUD3YOR216C 1455 nt2.82□□□□□ -1.96
MSH1P25846 GEA1YJR031C 4227 nt2.82□□□□□ -1.96
MSH1P25846 MLH1YMR167W 2310 nt2.81□□□□□ -1.96
MSH1P25846 IES5YER092W 378 nt2.81□□□□□ -1.96
MSH1P25846 RTR1YER139C 681 nt2.81□□□□□ -1.96
MSH1P25846 TIM8YJR135W-A 264 nt2.81□□□□□ -1.96
MSH1P25846 TIF11YMR260C 462 nt2.81□□□□□ -1.96
MSH1P25846 SLM6YBR266C 453 nt2.81□□□□□ -1.96
MSH1P25846 MGR1YCL044C 1254 nt2.81□□□□□ -1.96
MSH1P25846 YIL080WYIL080W 4722 nt2.81□□□□□ -1.96
MSH1P25846 ORC1YML065W 2745 nt2.8□□□□□ -1.96
MSH1P25846 YER087C-AYER087C-A 552 nt2.8□□□□□ -1.96
MSH1P25846 YHR138CYHR138C 345 nt2.8□□□□□ -1.96
MSH1P25846 YJR140W-AYJR140W-A 150 nt2.8□□□□□ -1.96
MSH1P25846 YAL042C-AYAL042C-A 378 nt2.8□□□□□ -1.96
MSH1P25846 YLR269CYLR269C 351 nt2.8□□□□□ -1.96
MSH1P25846 ICY1YMR195W 384 nt2.8□□□□□ -1.96
MSH1P25846 SEC26YDR238C 2922 nt2.8□□□□□ -1.96
MSH1P25846 SSY1YDR160W 2559 nt2.8□□□□□ -1.96
MSH1P25846 SKT5YBL061C 2091 nt2.8□□□□□ -1.96
MSH1P25846 TCB2YNL087W 3537 nt2.79□□□□□ -1.96
MSH1P25846 YDR194W-AYDR194W-A 153 nt2.79□□□□□ -1.96
MSH1P25846 AAD16YFL057C 459 nt2.79□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 41.9 ms