Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
XPAP23025 AL589743.5-201ENST00000616611 1050 ntBASIC20.65■□□□□ 0.9
XPAP23025 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.65■□□□□ 0.9
XPAP23025 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
XPAP23025 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
XPAP23025 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
XPAP23025 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.64■□□□□ 0.89
XPAP23025 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
XPAP23025 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.64■□□□□ 0.89
XPAP23025 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
XPAP23025 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
XPAP23025 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
XPAP23025 KRT18P68-201ENST00000392293 1000 ntBASIC20.64■□□□□ 0.89
XPAP23025 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
XPAP23025 AC073210.2-201ENST00000430369 194 ntBASIC20.64■□□□□ 0.89
XPAP23025 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.64■□□□□ 0.89
XPAP23025 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
XPAP23025 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
XPAP23025 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
XPAP23025 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
XPAP23025 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
XPAP23025 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
XPAP23025 CYP21A1P-202ENST00000354927 1481 ntBASIC20.63■□□□□ 0.89
XPAP23025 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
XPAP23025 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
XPAP23025 FEM1AP4-201ENST00000443167 1987 ntBASIC20.63■□□□□ 0.89
XPAP23025 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.63■□□□□ 0.89
XPAP23025 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.63■□□□□ 0.89
XPAP23025 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.63■□□□□ 0.89
XPAP23025 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
XPAP23025 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.63■□□□□ 0.89
XPAP23025 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
XPAP23025 PGM5P4-201ENST00000421970 445 ntBASIC20.63■□□□□ 0.89
XPAP23025 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.63■□□□□ 0.89
XPAP23025 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.63■□□□□ 0.89
XPAP23025 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.63■□□□□ 0.89
XPAP23025 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.63■□□□□ 0.89
XPAP23025 AC098934.4-201ENST00000564127 592 ntBASIC20.63■□□□□ 0.89
XPAP23025 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
XPAP23025 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
XPAP23025 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
XPAP23025 AC011484.1-201ENST00000377652 1995 ntBASIC20.63■□□□□ 0.89
XPAP23025 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
XPAP23025 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
XPAP23025 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
XPAP23025 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
XPAP23025 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.62■□□□□ 0.89
XPAP23025 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
XPAP23025 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
XPAP23025 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
XPAP23025 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
XPAP23025 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
XPAP23025 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
XPAP23025 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.62■□□□□ 0.89
XPAP23025 AC097658.1-201ENST00000475555 843 ntBASIC20.62■□□□□ 0.89
XPAP23025 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.62■□□□□ 0.89
XPAP23025 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.62■□□□□ 0.89
XPAP23025 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
XPAP23025 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
XPAP23025 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
XPAP23025 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
XPAP23025 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
XPAP23025 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
XPAP23025 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
XPAP23025 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
XPAP23025 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.62■□□□□ 0.89
XPAP23025 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.62■□□□□ 0.89
XPAP23025 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
XPAP23025 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
XPAP23025 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
XPAP23025 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
XPAP23025 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.61■□□□□ 0.89
XPAP23025 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.61■□□□□ 0.89
XPAP23025 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.61■□□□□ 0.89
XPAP23025 KRT17P1-201ENST00000399211 1546 ntBASIC20.61■□□□□ 0.89
XPAP23025 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.61■□□□□ 0.89
XPAP23025 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
XPAP23025 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
XPAP23025 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
XPAP23025 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
XPAP23025 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
XPAP23025 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
XPAP23025 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.6■□□□□ 0.89
XPAP23025 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.6■□□□□ 0.89
XPAP23025 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
XPAP23025 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.6■□□□□ 0.89
XPAP23025 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
XPAP23025 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.6■□□□□ 0.89
XPAP23025 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
XPAP23025 DUSP5P2-201ENST00000426873 1033 ntBASIC20.6■□□□□ 0.89
XPAP23025 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.6■□□□□ 0.89
XPAP23025 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.6■□□□□ 0.89
XPAP23025 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.6■□□□□ 0.89
XPAP23025 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.6■□□□□ 0.89
XPAP23025 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.6■□□□□ 0.89
XPAP23025 AC121338.2-201ENST00000622535 1744 ntBASIC20.6■□□□□ 0.89
XPAP23025 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
XPAP23025 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
XPAP23025 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
XPAP23025 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms