Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.67■□□□□ 0.74
CAPN3P20807 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN3P20807 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN3P20807 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN3P20807 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN3P20807 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN3P20807 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN3P20807 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.66■□□□□ 0.74
CAPN3P20807 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.66■□□□□ 0.74
CAPN3P20807 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN3P20807 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN3P20807 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CAPN3P20807 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CAPN3P20807 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.66■□□□□ 0.74
CAPN3P20807 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.66■□□□□ 0.74
CAPN3P20807 DUX4L2-201ENST00000561772 1275 ntBASIC19.66■□□□□ 0.74
CAPN3P20807 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.66■□□□□ 0.74
CAPN3P20807 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.66■□□□□ 0.74
CAPN3P20807 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.66■□□□□ 0.74
CAPN3P20807 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.66■□□□□ 0.74
CAPN3P20807 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
CAPN3P20807 DUX4L6-201ENST00000626483 1275 ntBASIC19.66■□□□□ 0.74
CAPN3P20807 DUX4L1-201ENST00000627662 1275 ntBASIC19.66■□□□□ 0.74
CAPN3P20807 DUX4L8-201ENST00000629013 1275 ntBASIC19.66■□□□□ 0.74
CAPN3P20807 DUX4L3-201ENST00000630187 1275 ntBASIC19.66■□□□□ 0.74
CAPN3P20807 DUX4L7-201ENST00000630678 1275 ntBASIC19.66■□□□□ 0.74
CAPN3P20807 DUX4L5-201ENST00000630834 1275 ntBASIC19.66■□□□□ 0.74
CAPN3P20807 TSPY26P-201ENST00000476365 1326 ntBASIC19.66■□□□□ 0.74
CAPN3P20807 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN3P20807 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN3P20807 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN3P20807 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN3P20807 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN3P20807 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN3P20807 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.65■□□□□ 0.74
CAPN3P20807 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN3P20807 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN3P20807 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.65■□□□□ 0.74
CAPN3P20807 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN3P20807 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN3P20807 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.65■□□□□ 0.74
CAPN3P20807 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN3P20807 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN3P20807 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.65■□□□□ 0.74
CAPN3P20807 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN3P20807 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CAPN3P20807 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.65■□□□□ 0.74
CAPN3P20807 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.65■□□□□ 0.74
CAPN3P20807 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.65■□□□□ 0.74
CAPN3P20807 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.65■□□□□ 0.74
CAPN3P20807 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN3P20807 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.65■□□□□ 0.74
CAPN3P20807 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN3P20807 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN3P20807 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.65■□□□□ 0.74
CAPN3P20807 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CAPN3P20807 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN3P20807 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPN3P20807 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CAPN3P20807 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CAPN3P20807 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
CAPN3P20807 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN3P20807 AC027612.3-201ENST00000413684 1047 ntBASIC19.64■□□□□ 0.73
CAPN3P20807 AC053503.5-201ENST00000601508 636 ntBASIC19.64■□□□□ 0.73
CAPN3P20807 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CAPN3P20807 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.64■□□□□ 0.73
CAPN3P20807 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN3P20807 AP004607.4-201ENST00000530158 1459 ntBASIC19.64■□□□□ 0.73
CAPN3P20807 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN3P20807 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN3P20807 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN3P20807 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN3P20807 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPN3P20807 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.63■□□□□ 0.73
CAPN3P20807 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CAPN3P20807 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CAPN3P20807 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.63■□□□□ 0.73
CAPN3P20807 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CAPN3P20807 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.63■□□□□ 0.73
CAPN3P20807 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CAPN3P20807 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.63■□□□□ 0.73
CAPN3P20807 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
CAPN3P20807 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.63■□□□□ 0.73
CAPN3P20807 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CAPN3P20807 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.63■□□□□ 0.73
CAPN3P20807 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CAPN3P20807 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.63■□□□□ 0.73
CAPN3P20807 TCF3P1-201ENST00000423021 1937 ntBASIC19.63■□□□□ 0.73
CAPN3P20807 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN3P20807 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN3P20807 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CAPN3P20807 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN3P20807 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN3P20807 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.62■□□□□ 0.73
CAPN3P20807 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CAPN3P20807 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPN3P20807 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.62■□□□□ 0.73
CAPN3P20807 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.62■□□□□ 0.73
CAPN3P20807 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.62■□□□□ 0.73
CAPN3P20807 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms