Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC130P13994 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CCDC130P13994 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC130P13994 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC130P13994 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC130P13994 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC130P13994 KRT18P68-201ENST00000392293 1000 ntBASIC21.7■■□□□ 1.06
CCDC130P13994 LSM12P1-201ENST00000411836 588 ntBASIC21.7■■□□□ 1.06
CCDC130P13994 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.7■■□□□ 1.06
CCDC130P13994 AC069152.1-201ENST00000438030 544 ntBASIC21.7■■□□□ 1.06
CCDC130P13994 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.7■■□□□ 1.06
CCDC130P13994 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC130P13994 MIR4758-201ENST00000577688 71 ntBASIC21.7■■□□□ 1.06
CCDC130P13994 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC130P13994 AC092118.2-201ENST00000613495 667 ntBASIC21.7■■□□□ 1.06
CCDC130P13994 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC130P13994 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC130P13994 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC130P13994 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC130P13994 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC130P13994 AC087633.2-202ENST00000565166 1439 ntBASIC21.7■■□□□ 1.06
CCDC130P13994 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC130P13994 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC130P13994 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC130P13994 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC130P13994 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC130P13994 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC130P13994 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC130P13994 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CCDC130P13994 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.69■■□□□ 1.06
CCDC130P13994 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
CCDC130P13994 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC130P13994 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC130P13994 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CCDC130P13994 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC130P13994 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC130P13994 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CCDC130P13994 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC130P13994 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC130P13994 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CCDC130P13994 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCDC130P13994 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCDC130P13994 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC130P13994 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.68■■□□□ 1.06
CCDC130P13994 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC130P13994 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC130P13994 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CCDC130P13994 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC130P13994 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC130P13994 AC006128.1-201ENST00000624704 1661 ntBASIC21.68■■□□□ 1.06
CCDC130P13994 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC130P13994 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC130P13994 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC130P13994 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CCDC130P13994 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC130P13994 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC130P13994 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC130P13994 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC130P13994 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC130P13994 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC130P13994 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC130P13994 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC130P13994 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC130P13994 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CCDC130P13994 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC130P13994 DUSP5P2-201ENST00000426873 1033 ntBASIC21.67■■□□□ 1.06
CCDC130P13994 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.67■■□□□ 1.06
CCDC130P13994 AC133041.1-202ENST00000642053 222 ntBASIC21.67■■□□□ 1.06
CCDC130P13994 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC130P13994 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC130P13994 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC130P13994 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC130P13994 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC130P13994 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
CCDC130P13994 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC130P13994 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC130P13994 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC130P13994 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CCDC130P13994 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC130P13994 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CCDC130P13994 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC130P13994 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
CCDC130P13994 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC130P13994 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC130P13994 AL589743.5-201ENST00000616611 1050 ntBASIC21.66■■□□□ 1.06
CCDC130P13994 AC105020.6-201ENST00000621523 1217 ntBASIC21.66■■□□□ 1.06
CCDC130P13994 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC130P13994 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC130P13994 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CCDC130P13994 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC130P13994 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC130P13994 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CCDC130P13994 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC130P13994 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC130P13994 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC130P13994 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC130P13994 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CCDC130P13994 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.65■■□□□ 1.06
CCDC130P13994 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC130P13994 AL356652.1-201ENST00000615962 565 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms