Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.23■■□□□ 1.79
SNRPA1P09661 AC012676.1-201ENST00000574705 1949 ntBASIC26.22■■□□□ 1.79
SNRPA1P09661 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SNRPA1P09661 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC26.22■■□□□ 1.79
SNRPA1P09661 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC26.22■■□□□ 1.79
SNRPA1P09661 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC26.22■■□□□ 1.79
SNRPA1P09661 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SNRPA1P09661 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.22■■□□□ 1.79
SNRPA1P09661 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.22■■□□□ 1.79
SNRPA1P09661 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SNRPA1P09661 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC26.22■■□□□ 1.79
SNRPA1P09661 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SNRPA1P09661 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SNRPA1P09661 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC26.22■■□□□ 1.79
SNRPA1P09661 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC26.21■■□□□ 1.79
SNRPA1P09661 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SNRPA1P09661 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SNRPA1P09661 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.21■■□□□ 1.79
SNRPA1P09661 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
SNRPA1P09661 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SNRPA1P09661 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.21■■□□□ 1.79
SNRPA1P09661 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SNRPA1P09661 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
SNRPA1P09661 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNRPA1P09661 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNRPA1P09661 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNRPA1P09661 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNRPA1P09661 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SNRPA1P09661 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNRPA1P09661 AC120498.8-201ENST00000614275 531 ntBASIC26.2■■□□□ 1.78
SNRPA1P09661 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC26.2■■□□□ 1.78
SNRPA1P09661 FBXW4P1-201ENST00000426721 2239 ntBASIC26.2■■□□□ 1.78
SNRPA1P09661 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.78
SNRPA1P09661 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SNRPA1P09661 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRPA1P09661 EP400NL-214ENST00000641289 2402 ntBASIC26.19■■□□□ 1.78
SNRPA1P09661 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.19■■□□□ 1.78
SNRPA1P09661 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC26.19■■□□□ 1.78
SNRPA1P09661 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SNRPA1P09661 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRPA1P09661 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRPA1P09661 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRPA1P09661 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SNRPA1P09661 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
SNRPA1P09661 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
SNRPA1P09661 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SNRPA1P09661 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRPA1P09661 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
SNRPA1P09661 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC26.19■■□□□ 1.78
SNRPA1P09661 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRPA1P09661 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC26.19■■□□□ 1.78
SNRPA1P09661 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC26.19■■□□□ 1.78
SNRPA1P09661 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRPA1P09661 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRPA1P09661 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRPA1P09661 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SNRPA1P09661 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SNRPA1P09661 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
SNRPA1P09661 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNRPA1P09661 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNRPA1P09661 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNRPA1P09661 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC26.18■■□□□ 1.78
SNRPA1P09661 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC26.18■■□□□ 1.78
SNRPA1P09661 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
SNRPA1P09661 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC26.18■■□□□ 1.78
SNRPA1P09661 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.18■■□□□ 1.78
SNRPA1P09661 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
SNRPA1P09661 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
SNRPA1P09661 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SNRPA1P09661 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC26.18■■□□□ 1.78
SNRPA1P09661 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
SNRPA1P09661 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
SNRPA1P09661 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.18■■□□□ 1.78
SNRPA1P09661 AC006557.6-201ENST00000623071 864 ntBASIC26.18■■□□□ 1.78
SNRPA1P09661 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC26.18■■□□□ 1.78
SNRPA1P09661 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNRPA1P09661 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRPA1P09661 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRPA1P09661 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.17■■□□□ 1.78
SNRPA1P09661 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SNRPA1P09661 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SNRPA1P09661 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC26.17■■□□□ 1.78
SNRPA1P09661 AC133561.1-201ENST00000568600 2415 ntBASIC26.17■■□□□ 1.78
SNRPA1P09661 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
SNRPA1P09661 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRPA1P09661 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.17■■□□□ 1.78
SNRPA1P09661 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.17■■□□□ 1.78
SNRPA1P09661 MTDHP1-201ENST00000605323 784 ntBASIC26.17■■□□□ 1.78
SNRPA1P09661 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRPA1P09661 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SNRPA1P09661 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.17■■□□□ 1.78
SNRPA1P09661 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SNRPA1P09661 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRPA1P09661 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRPA1P09661 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRPA1P09661 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
SNRPA1P09661 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SNRPA1P09661 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
SNRPA1P09661 AC027702.1-201ENST00000563810 1770 ntBASIC26.16■■□□□ 1.78
SNRPA1P09661 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms