Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 SNT1YCR033W 3681 nt3.13□□□□□ -1.91
CDC9P04819 SLA1YBL007C 3735 nt3.13□□□□□ -1.91
CDC9P04819 PSO2YMR137C 1986 nt3.12□□□□□ -1.91
CDC9P04819 ITC1YGL133W 3795 nt3.12□□□□□ -1.91
CDC9P04819 COX1Q0045 1605 nt3.12□□□□□ -1.91
CDC9P04819 YIL054WYIL054W 318 nt3.12□□□□□ -1.91
CDC9P04819 APC9YLR102C 798 nt3.12□□□□□ -1.91
CDC9P04819 YLR458WYLR458W 381 nt3.12□□□□□ -1.91
CDC9P04819 MSS11YMR164C 2277 nt3.12□□□□□ -1.91
CDC9P04819 snR76snR76 109 nt3.11□□□□□ -1.91
CDC9P04819 tF(GAA)DtF(GAA)D 73 nt3.11□□□□□ -1.91
CDC9P04819 tF(GAA)NtF(GAA)N 73 nt3.11□□□□□ -1.91
CDC9P04819 RPS22BYLR367W 393 nt3.11□□□□□ -1.91
CDC9P04819 COX7YMR256C 183 nt3.11□□□□□ -1.91
CDC9P04819 RGR1YLR071C 3249 nt3.11□□□□□ -1.91
CDC9P04819 VPS52YDR484W 1926 nt3.11□□□□□ -1.91
CDC9P04819 GIS4YML006C 2325 nt3.1□□□□□ -1.91
CDC9P04819 YEL025CYEL025C 3567 nt3.1□□□□□ -1.91
CDC9P04819 YFL065CYFL065C 309 nt3.1□□□□□ -1.91
CDC9P04819 GPI14YJR013W 1212 nt3.1□□□□□ -1.91
CDC9P04819 YKL118WYKL118W 312 nt3.1□□□□□ -1.91
CDC9P04819 GIS2YNL255C 462 nt3.1□□□□□ -1.91
CDC9P04819 COQ10YOL008W 624 nt3.1□□□□□ -1.91
CDC9P04819 SKP2YNL311C 2292 nt3.1□□□□□ -1.91
CDC9P04819 TCP1YDR212W 1680 nt3.1□□□□□ -1.91
CDC9P04819 SKT5YBL061C 2091 nt3.1□□□□□ -1.91
CDC9P04819 FLO9YAL063C 3969 nt3.1□□□□□ -1.91
CDC9P04819 YJL181WYJL181W 1836 nt3.09□□□□□ -1.91
CDC9P04819 BMS1YPL217C 3552 nt3.09□□□□□ -1.91
CDC9P04819 CDC50YCR094W 1176 nt3.09□□□□□ -1.91
CDC9P04819 YHR214C-EYHR214C-E 300 nt3.09□□□□□ -1.91
CDC9P04819 ABM1YJR108W 372 nt3.09□□□□□ -1.91
CDC9P04819 RAM2YKL019W 951 nt3.09□□□□□ -1.91
CDC9P04819 YAR070CYAR070C 300 nt3.09□□□□□ -1.91
CDC9P04819 YMR122W-AYMR122W-A 255 nt3.09□□□□□ -1.91
CDC9P04819 EGD1YPL037C 474 nt3.09□□□□□ -1.91
CDC9P04819 YPL225WYPL225W 441 nt3.09□□□□□ -1.91
CDC9P04819 TRM7YBR061C 933 nt3.09□□□□□ -1.91
CDC9P04819 ATP15YPL271W 189 nt3.09□□□□□ -1.91
CDC9P04819 MIT1YEL007W 2001 nt3.09□□□□□ -1.92
CDC9P04819 STT4YLR305C 5703 nt3.08□□□□□ -1.92
CDC9P04819 CHO2YGR157W 2610 nt3.08□□□□□ -1.92
CDC9P04819 YDL041WYDL041W 354 nt3.08□□□□□ -1.92
CDC9P04819 AAD16YFL057C 459 nt3.08□□□□□ -1.92
CDC9P04819 RPS21AYKR057W 264 nt3.08□□□□□ -1.92
CDC9P04819 YAL064W-BYAL064W-B 381 nt3.08□□□□□ -1.92
CDC9P04819 YBR197CYBR197C 654 nt3.08□□□□□ -1.92
CDC9P04819 YER181CYER181C 324 nt3.07□□□□□ -1.92
CDC9P04819 MRPL31YKL138C 396 nt3.07□□□□□ -1.92
CDC9P04819 BIL1YOR304C-A 231 nt3.07□□□□□ -1.92
CDC9P04819 RRP5YMR229C 5190 nt3.07□□□□□ -1.92
CDC9P04819 AUS1YOR011W 4185 nt3.07□□□□□ -1.92
CDC9P04819 YDR008CYDR008C 351 nt3.06□□□□□ -1.92
CDC9P04819 tK(UUU)DtK(UUU)D 73 nt3.06□□□□□ -1.92
CDC9P04819 tK(UUU)G1tK(UUU)G1 73 nt3.06□□□□□ -1.92
CDC9P04819 tK(UUU)G2tK(UUU)G2 73 nt3.06□□□□□ -1.92
CDC9P04819 tK(UUU)KtK(UUU)K 73 nt3.06□□□□□ -1.92
CDC9P04819 tK(UUU)LtK(UUU)L 73 nt3.06□□□□□ -1.92
CDC9P04819 tK(UUU)OtK(UUU)O 73 nt3.06□□□□□ -1.92
CDC9P04819 tK(UUU)PtK(UUU)P 73 nt3.06□□□□□ -1.92
CDC9P04819 MAM33YIL070C 801 nt3.06□□□□□ -1.92
CDC9P04819 NET1YJL076W 3570 nt3.06□□□□□ -1.92
CDC9P04819 RPS18BYML026C 441 nt3.06□□□□□ -1.92
CDC9P04819 RGM1YMR182C 636 nt3.06□□□□□ -1.92
CDC9P04819 YBL108WYBL108W 306 nt3.06□□□□□ -1.92
CDC9P04819 DNL4YOR005C 2835 nt3.06□□□□□ -1.92
CDC9P04819 NAB3YPL190C 2409 nt3.05□□□□□ -1.92
CDC9P04819 VTC4YJL012C 2166 nt3.05□□□□□ -1.92
CDC9P04819 STU2YLR045C 2667 nt3.05□□□□□ -1.92
CDC9P04819 PSF1YDR013W 627 nt3.05□□□□□ -1.92
CDC9P04819 AYR1YIL124W 894 nt3.05□□□□□ -1.92
CDC9P04819 RPL40AYIL148W 387 nt3.05□□□□□ -1.92
CDC9P04819 TMA22YJR014W 597 nt3.05□□□□□ -1.92
CDC9P04819 CCW14YLR390W-A 717 nt3.05□□□□□ -1.92
CDC9P04819 RPL9BYNL067W 576 nt3.05□□□□□ -1.92
CDC9P04819 IRC10YOL015W 1761 nt3.05□□□□□ -1.92
CDC9P04819 SHQ1YIL104C 1524 nt3.04□□□□□ -1.92
CDC9P04819 DBP7YKR024C 2229 nt3.04□□□□□ -1.92
CDC9P04819 TLC1TLC1 1301 nt3.04□□□□□ -1.92
CDC9P04819 YGR107WYGR107W 450 nt3.04□□□□□ -1.92
CDC9P04819 MBB1YJL199C 327 nt3.04□□□□□ -1.92
CDC9P04819 ROM1YGR070W 3468 nt3.04□□□□□ -1.92
CDC9P04819 ASG1YIL130W 2895 nt3.04□□□□□ -1.92
CDC9P04819 ROG1YGL144C 2058 nt3.04□□□□□ -1.92
CDC9P04819 DOA4YDR069C 2781 nt3.03□□□□□ -1.92
CDC9P04819 snR79snR79 84 nt3.03□□□□□ -1.92
CDC9P04819 YER039C-AYER039C-A 219 nt3.03□□□□□ -1.92
CDC9P04819 YHL037CYHL037C 402 nt3.03□□□□□ -1.92
CDC9P04819 PAU14YIL176C 363 nt3.03□□□□□ -1.92
CDC9P04819 PAU1YJL223C 363 nt3.03□□□□□ -1.92
CDC9P04819 YAR053WYAR053W 297 nt3.03□□□□□ -1.92
CDC9P04819 YNL010WYNL010W 726 nt3.03□□□□□ -1.92
CDC9P04819 RPL25YOL127W 429 nt3.03□□□□□ -1.92
CDC9P04819 YHR078WYHR078W 1659 nt3.03□□□□□ -1.92
CDC9P04819 ORC1YML065W 2745 nt3.03□□□□□ -1.92
CDC9P04819 SIN3YOL004W 4611 nt3.02□□□□□ -1.93
CDC9P04819 YER023C-AYER023C-A 213 nt3.02□□□□□ -1.93
CDC9P04819 MSL1YIR009W 336 nt3.02□□□□□ -1.93
CDC9P04819 COA4YLR218C 453 nt3.02□□□□□ -1.93
CDC9P04819 YMR031W-AYMR031W-A 327 nt3.02□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 47 ms