Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
OPN1SWP03999 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
OPN1SWP03999 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
OPN1SWP03999 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
OPN1SWP03999 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
OPN1SWP03999 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
OPN1SWP03999 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OPN1SWP03999 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.09■□□□□ 0.65
OPN1SWP03999 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.09■□□□□ 0.65
OPN1SWP03999 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OPN1SWP03999 POU5F1P4-201ENST00000413175 1085 ntBASIC19.09■□□□□ 0.65
OPN1SWP03999 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.09■□□□□ 0.65
OPN1SWP03999 AC142381.2-201ENST00000566120 298 ntBASIC19.09■□□□□ 0.65
OPN1SWP03999 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.09■□□□□ 0.65
OPN1SWP03999 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.09■□□□□ 0.65
OPN1SWP03999 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OPN1SWP03999 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OPN1SWP03999 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OPN1SWP03999 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
OPN1SWP03999 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
OPN1SWP03999 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OPN1SWP03999 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
OPN1SWP03999 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.09■□□□□ 0.65
OPN1SWP03999 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.08■□□□□ 0.65
OPN1SWP03999 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
OPN1SWP03999 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
OPN1SWP03999 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
OPN1SWP03999 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.08■□□□□ 0.65
OPN1SWP03999 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.08■□□□□ 0.65
OPN1SWP03999 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
OPN1SWP03999 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
OPN1SWP03999 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPN1SWP03999 AL139246.5-201ENST00000606645 996 ntBASIC19.08■□□□□ 0.64
OPN1SWP03999 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPN1SWP03999 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.08■□□□□ 0.64
OPN1SWP03999 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.08■□□□□ 0.64
OPN1SWP03999 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPN1SWP03999 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.08■□□□□ 0.64
OPN1SWP03999 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
OPN1SWP03999 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
OPN1SWP03999 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
OPN1SWP03999 AC092720.2-201ENST00000602388 1665 ntBASIC19.08■□□□□ 0.64
OPN1SWP03999 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
OPN1SWP03999 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.07■□□□□ 0.64
OPN1SWP03999 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
OPN1SWP03999 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
OPN1SWP03999 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
OPN1SWP03999 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.07■□□□□ 0.64
OPN1SWP03999 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
OPN1SWP03999 AC007952.6-201ENST00000573168 2673 ntBASIC19.07■□□□□ 0.64
OPN1SWP03999 AC003957.1-201ENST00000625108 2673 ntBASIC19.07■□□□□ 0.64
OPN1SWP03999 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.07■□□□□ 0.64
OPN1SWP03999 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
OPN1SWP03999 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
OPN1SWP03999 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
OPN1SWP03999 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
OPN1SWP03999 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
OPN1SWP03999 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
OPN1SWP03999 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.07■□□□□ 0.64
OPN1SWP03999 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.07■□□□□ 0.64
OPN1SWP03999 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
OPN1SWP03999 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
OPN1SWP03999 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.07■□□□□ 0.64
OPN1SWP03999 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.07■□□□□ 0.64
OPN1SWP03999 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPN1SWP03999 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPN1SWP03999 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
OPN1SWP03999 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
OPN1SWP03999 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPN1SWP03999 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.06■□□□□ 0.64
OPN1SWP03999 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.06■□□□□ 0.64
OPN1SWP03999 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPN1SWP03999 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPN1SWP03999 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPN1SWP03999 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.06■□□□□ 0.64
OPN1SWP03999 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
OPN1SWP03999 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
OPN1SWP03999 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.06■□□□□ 0.64
OPN1SWP03999 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.06■□□□□ 0.64
OPN1SWP03999 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
OPN1SWP03999 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
OPN1SWP03999 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPN1SWP03999 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
OPN1SWP03999 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
OPN1SWP03999 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
OPN1SWP03999 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
OPN1SWP03999 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.05■□□□□ 0.64
OPN1SWP03999 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
OPN1SWP03999 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
OPN1SWP03999 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
OPN1SWP03999 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPN1SWP03999 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPN1SWP03999 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPN1SWP03999 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.05■□□□□ 0.64
OPN1SWP03999 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
OPN1SWP03999 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
OPN1SWP03999 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
OPN1SWP03999 AC245052.3-201ENST00000450182 901 ntBASIC19.05■□□□□ 0.64
OPN1SWP03999 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.05■□□□□ 0.64
OPN1SWP03999 AC138907.5-202ENST00000569484 235 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms