Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPTM1O96005 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLPTM1O96005 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLPTM1O96005 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.23■□□□□ 0.67
CLPTM1O96005 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLPTM1O96005 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.23■□□□□ 0.67
CLPTM1O96005 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 AC006455.2-201ENST00000429931 906 ntBASIC19.23■□□□□ 0.67
CLPTM1O96005 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLPTM1O96005 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
CLPTM1O96005 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLPTM1O96005 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.23■□□□□ 0.67
CLPTM1O96005 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.23■□□□□ 0.67
CLPTM1O96005 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLPTM1O96005 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
CLPTM1O96005 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CLPTM1O96005 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLPTM1O96005 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPTM1O96005 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CLPTM1O96005 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
CLPTM1O96005 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.22■□□□□ 0.67
CLPTM1O96005 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLPTM1O96005 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.22■□□□□ 0.67
CLPTM1O96005 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CLPTM1O96005 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLPTM1O96005 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.22■□□□□ 0.67
CLPTM1O96005 UNC93B3-201ENST00000308076 687 ntBASIC19.22■□□□□ 0.67
CLPTM1O96005 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.22■□□□□ 0.67
CLPTM1O96005 AC110285.6-201ENST00000617652 491 ntBASIC19.22■□□□□ 0.67
CLPTM1O96005 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.22■□□□□ 0.67
CLPTM1O96005 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLPTM1O96005 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CLPTM1O96005 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLPTM1O96005 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.22■□□□□ 0.67
CLPTM1O96005 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPTM1O96005 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLPTM1O96005 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CLPTM1O96005 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.22■□□□□ 0.67
CLPTM1O96005 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPTM1O96005 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLPTM1O96005 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPTM1O96005 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CLPTM1O96005 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.21■□□□□ 0.67
CLPTM1O96005 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLPTM1O96005 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.21■□□□□ 0.67
CLPTM1O96005 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPTM1O96005 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CLPTM1O96005 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLPTM1O96005 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CLPTM1O96005 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPTM1O96005 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CLPTM1O96005 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLPTM1O96005 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLPTM1O96005 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.21■□□□□ 0.67
CLPTM1O96005 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLPTM1O96005 AC007225.1-201ENST00000566331 1836 ntBASIC19.21■□□□□ 0.67
CLPTM1O96005 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLPTM1O96005 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPTM1O96005 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.2■□□□□ 0.66
CLPTM1O96005 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPTM1O96005 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPTM1O96005 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.2■□□□□ 0.66
CLPTM1O96005 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLPTM1O96005 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPTM1O96005 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPTM1O96005 AC241377.3-202ENST00000626088 1088 ntBASIC19.2■□□□□ 0.66
CLPTM1O96005 AC241585.3-202ENST00000628937 1088 ntBASIC19.2■□□□□ 0.66
CLPTM1O96005 AC245100.8-202ENST00000629247 1058 ntBASIC19.2■□□□□ 0.66
CLPTM1O96005 AC138932.1-201ENST00000534164 6830 ntBASIC19.2■□□□□ 0.66
CLPTM1O96005 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPTM1O96005 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLPTM1O96005 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CLPTM1O96005 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CLPTM1O96005 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
CLPTM1O96005 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
CLPTM1O96005 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1O96005 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLPTM1O96005 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1O96005 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1O96005 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1O96005 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1O96005 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1O96005 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1O96005 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLPTM1O96005 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1O96005 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms