Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE6O95741 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE6O95741 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE6O95741 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE6O95741 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CPNE6O95741 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE6O95741 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE6O95741 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CPNE6O95741 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE6O95741 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE6O95741 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE6O95741 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CPNE6O95741 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE6O95741 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE6O95741 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.05■□□□□ 0.8
CPNE6O95741 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE6O95741 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE6O95741 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.05■□□□□ 0.8
CPNE6O95741 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CPNE6O95741 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE6O95741 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.05■□□□□ 0.8
CPNE6O95741 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE6O95741 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.05■□□□□ 0.8
CPNE6O95741 AC100791.3-201ENST00000617619 330 ntBASIC20.05■□□□□ 0.8
CPNE6O95741 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CPNE6O95741 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CPNE6O95741 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CPNE6O95741 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE6O95741 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE6O95741 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE6O95741 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE6O95741 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE6O95741 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE6O95741 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
CPNE6O95741 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CPNE6O95741 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.04■□□□□ 0.8
CPNE6O95741 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.04■□□□□ 0.8
CPNE6O95741 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE6O95741 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE6O95741 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE6O95741 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE6O95741 AC008687.6-201ENST00000596318 630 ntBASIC20.04■□□□□ 0.8
CPNE6O95741 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE6O95741 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE6O95741 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE6O95741 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE6O95741 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE6O95741 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE6O95741 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE6O95741 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE6O95741 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE6O95741 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.04■□□□□ 0.8
CPNE6O95741 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE6O95741 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CPNE6O95741 AC244015.2-201ENST00000616358 1861 ntBASIC20.03■□□□□ 0.8
CPNE6O95741 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE6O95741 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CPNE6O95741 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CPNE6O95741 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE6O95741 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.03■□□□□ 0.8
CPNE6O95741 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CPNE6O95741 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE6O95741 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE6O95741 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE6O95741 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CPNE6O95741 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.03■□□□□ 0.8
CPNE6O95741 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.03■□□□□ 0.8
CPNE6O95741 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.03■□□□□ 0.8
CPNE6O95741 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.03■□□□□ 0.8
CPNE6O95741 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.03■□□□□ 0.8
CPNE6O95741 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE6O95741 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CPNE6O95741 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE6O95741 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE6O95741 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE6O95741 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE6O95741 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
CPNE6O95741 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE6O95741 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.02■□□□□ 0.8
CPNE6O95741 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.02■□□□□ 0.8
CPNE6O95741 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE6O95741 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CPNE6O95741 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE6O95741 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE6O95741 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE6O95741 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.02■□□□□ 0.8
CPNE6O95741 ESRRAP1-201ENST00000400596 1257 ntBASIC20.02■□□□□ 0.8
CPNE6O95741 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CPNE6O95741 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.02■□□□□ 0.8
CPNE6O95741 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE6O95741 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.02■□□□□ 0.8
CPNE6O95741 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE6O95741 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.02■□□□□ 0.8
CPNE6O95741 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPNE6O95741 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.02■□□□□ 0.79
CPNE6O95741 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CPNE6O95741 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.01■□□□□ 0.79
CPNE6O95741 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE6O95741 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE6O95741 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms