Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PRAMEF1O95521 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
PRAMEF1O95521 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF1O95521 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PRAMEF1O95521 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.38■□□□□ 0.85
PRAMEF1O95521 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 CYP21A1P-202ENST00000354927 1481 ntBASIC20.37■□□□□ 0.85
PRAMEF1O95521 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PRAMEF1O95521 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.37■□□□□ 0.85
PRAMEF1O95521 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.37■□□□□ 0.85
PRAMEF1O95521 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.37■□□□□ 0.85
PRAMEF1O95521 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF1O95521 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF1O95521 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF1O95521 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF1O95521 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF1O95521 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.36■□□□□ 0.85
PRAMEF1O95521 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.36■□□□□ 0.85
PRAMEF1O95521 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF1O95521 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF1O95521 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF1O95521 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF1O95521 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEF1O95521 AC133552.2-202ENST00000575694 574 ntBASIC20.36■□□□□ 0.85
PRAMEF1O95521 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.36■□□□□ 0.85
PRAMEF1O95521 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF1O95521 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF1O95521 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEF1O95521 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF1O95521 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF1O95521 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF1O95521 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.35■□□□□ 0.85
PRAMEF1O95521 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF1O95521 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
PRAMEF1O95521 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF1O95521 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.35■□□□□ 0.85
PRAMEF1O95521 AC093787.1-201ENST00000450396 207 ntBASIC20.35■□□□□ 0.85
PRAMEF1O95521 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF1O95521 AC090192.1-201ENST00000517740 490 ntBASIC20.35■□□□□ 0.85
PRAMEF1O95521 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.35■□□□□ 0.85
PRAMEF1O95521 AC100791.3-201ENST00000617619 330 ntBASIC20.35■□□□□ 0.85
PRAMEF1O95521 MIR2861-201ENST00000636310 90 ntBASIC20.35■□□□□ 0.85
PRAMEF1O95521 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF1O95521 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PRAMEF1O95521 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF1O95521 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF1O95521 AL121603.2-201ENST00000557373 2117 ntBASIC20.35■□□□□ 0.85
PRAMEF1O95521 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PRAMEF1O95521 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF1O95521 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
PRAMEF1O95521 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PRAMEF1O95521 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PRAMEF1O95521 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PRAMEF1O95521 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF1O95521 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.34■□□□□ 0.85
PRAMEF1O95521 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.34■□□□□ 0.85
PRAMEF1O95521 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PRAMEF1O95521 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF1O95521 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PRAMEF1O95521 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF1O95521 AC087633.2-202ENST00000565166 1439 ntBASIC20.34■□□□□ 0.85
PRAMEF1O95521 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF1O95521 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF1O95521 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF1O95521 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF1O95521 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF1O95521 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF1O95521 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.33■□□□□ 0.85
PRAMEF1O95521 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEF1O95521 MCRIP2P1-201ENST00000394346 511 ntBASIC20.33■□□□□ 0.85
PRAMEF1O95521 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.33■□□□□ 0.85
PRAMEF1O95521 AC105036.2-201ENST00000569468 176 ntBASIC20.33■□□□□ 0.85
PRAMEF1O95521 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
PRAMEF1O95521 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEF1O95521 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEF1O95521 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.33■□□□□ 0.84
PRAMEF1O95521 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.33■□□□□ 0.84
PRAMEF1O95521 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.32■□□□□ 0.84
PRAMEF1O95521 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF1O95521 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.32■□□□□ 0.84
PRAMEF1O95521 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF1O95521 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.32■□□□□ 0.84
PRAMEF1O95521 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF1O95521 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms