Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.58■■□□□ 1.04
RTN3O95197 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.58■■□□□ 1.04
RTN3O95197 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RTN3O95197 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RTN3O95197 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.57■■□□□ 1.04
RTN3O95197 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.57■■□□□ 1.04
RTN3O95197 PGM5P4-201ENST00000421970 445 ntBASIC21.57■■□□□ 1.04
RTN3O95197 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.57■■□□□ 1.04
RTN3O95197 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.57■■□□□ 1.04
RTN3O95197 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.57■■□□□ 1.04
RTN3O95197 AC083880.1-201ENST00000608266 535 ntBASIC21.57■■□□□ 1.04
RTN3O95197 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.57■■□□□ 1.04
RTN3O95197 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTN3O95197 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTN3O95197 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTN3O95197 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTN3O95197 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
RTN3O95197 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.57■■□□□ 1.04
RTN3O95197 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTN3O95197 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTN3O95197 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTN3O95197 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RTN3O95197 AC011484.1-201ENST00000377652 1995 ntBASIC21.56■■□□□ 1.04
RTN3O95197 AL137060.1-201ENST00000618151 2648 ntBASIC21.56■■□□□ 1.04
RTN3O95197 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTN3O95197 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.56■■□□□ 1.04
RTN3O95197 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.56■■□□□ 1.04
RTN3O95197 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTN3O95197 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.56■■□□□ 1.04
RTN3O95197 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.56■■□□□ 1.04
RTN3O95197 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RTN3O95197 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RTN3O95197 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTN3O95197 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTN3O95197 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RTN3O95197 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTN3O95197 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RTN3O95197 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN3O95197 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTN3O95197 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RTN3O95197 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN3O95197 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN3O95197 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RTN3O95197 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTN3O95197 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN3O95197 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTN3O95197 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RTN3O95197 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN3O95197 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN3O95197 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RTN3O95197 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.55■■□□□ 1.04
RTN3O95197 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.55■■□□□ 1.04
RTN3O95197 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN3O95197 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RTN3O95197 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RTN3O95197 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.55■■□□□ 1.04
RTN3O95197 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN3O95197 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN3O95197 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
RTN3O95197 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN3O95197 AC087633.2-202ENST00000565166 1439 ntBASIC21.55■■□□□ 1.04
RTN3O95197 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN3O95197 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN3O95197 AL049796.1-201ENST00000565336 1766 ntBASIC21.54■■□□□ 1.04
RTN3O95197 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.54■■□□□ 1.04
RTN3O95197 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN3O95197 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTN3O95197 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN3O95197 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
RTN3O95197 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.54■■□□□ 1.04
RTN3O95197 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
RTN3O95197 AC105020.6-201ENST00000621523 1217 ntBASIC21.54■■□□□ 1.04
RTN3O95197 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.54■■□□□ 1.04
RTN3O95197 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN3O95197 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTN3O95197 AC073130.3-201ENST00000624389 2278 ntBASIC21.54■■□□□ 1.04
RTN3O95197 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN3O95197 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.54■■□□□ 1.04
RTN3O95197 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.54■■□□□ 1.04
RTN3O95197 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN3O95197 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.53■■□□□ 1.04
RTN3O95197 AL391422.3-201ENST00000603791 2761 ntBASIC21.53■■□□□ 1.04
RTN3O95197 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
RTN3O95197 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN3O95197 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RTN3O95197 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.53■■□□□ 1.04
RTN3O95197 RNA5SP413-201ENST00000516373 109 ntBASIC21.53■■□□□ 1.04
RTN3O95197 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.53■■□□□ 1.04
RTN3O95197 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.53■■□□□ 1.04
RTN3O95197 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.53■■□□□ 1.04
RTN3O95197 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.53■■□□□ 1.04
RTN3O95197 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTN3O95197 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.53■■□□□ 1.04
RTN3O95197 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RTN3O95197 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTN3O95197 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN3O95197 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.53■■□□□ 1.04
RTN3O95197 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN3O95197 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.53■■□□□ 1.04
RTN3O95197 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms