Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NDUFS3O75489 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.39■□□□□ 0.85
NDUFS3O75489 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDUFS3O75489 LINC01521-201ENST00000504184 1943 ntBASIC20.39■□□□□ 0.85
NDUFS3O75489 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDUFS3O75489 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
NDUFS3O75489 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.39■□□□□ 0.85
NDUFS3O75489 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NDUFS3O75489 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.39■□□□□ 0.85
NDUFS3O75489 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NDUFS3O75489 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NDUFS3O75489 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NDUFS3O75489 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NDUFS3O75489 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NDUFS3O75489 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NDUFS3O75489 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NDUFS3O75489 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.38■□□□□ 0.85
NDUFS3O75489 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.38■□□□□ 0.85
NDUFS3O75489 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NDUFS3O75489 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.38■□□□□ 0.85
NDUFS3O75489 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.38■□□□□ 0.85
NDUFS3O75489 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NDUFS3O75489 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.38■□□□□ 0.85
NDUFS3O75489 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDUFS3O75489 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NDUFS3O75489 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NDUFS3O75489 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDUFS3O75489 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
NDUFS3O75489 AC073314.1-201ENST00000568729 2216 ntBASIC20.37■□□□□ 0.85
NDUFS3O75489 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.37■□□□□ 0.85
NDUFS3O75489 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.37■□□□□ 0.85
NDUFS3O75489 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.37■□□□□ 0.85
NDUFS3O75489 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDUFS3O75489 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.37■□□□□ 0.85
NDUFS3O75489 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.37■□□□□ 0.85
NDUFS3O75489 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDUFS3O75489 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NDUFS3O75489 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.37■□□□□ 0.85
NDUFS3O75489 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NDUFS3O75489 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NDUFS3O75489 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NDUFS3O75489 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.36■□□□□ 0.85
NDUFS3O75489 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
NDUFS3O75489 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NDUFS3O75489 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.36■□□□□ 0.85
NDUFS3O75489 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFS3O75489 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFS3O75489 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFS3O75489 AP005212.1-201ENST00000581547 1997 ntBASIC20.36■□□□□ 0.85
NDUFS3O75489 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
NDUFS3O75489 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NDUFS3O75489 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFS3O75489 MIR935-201ENST00000401179 91 ntBASIC20.36■□□□□ 0.85
NDUFS3O75489 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFS3O75489 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFS3O75489 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFS3O75489 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
NDUFS3O75489 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFS3O75489 AL591742.1-201ENST00000604433 565 ntBASIC20.36■□□□□ 0.85
NDUFS3O75489 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFS3O75489 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFS3O75489 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFS3O75489 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFS3O75489 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFS3O75489 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NDUFS3O75489 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
NDUFS3O75489 GABARAPL3-202ENST00000624044 1851 ntBASIC20.35■□□□□ 0.85
NDUFS3O75489 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFS3O75489 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFS3O75489 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFS3O75489 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFS3O75489 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFS3O75489 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFS3O75489 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.35■□□□□ 0.85
NDUFS3O75489 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.35■□□□□ 0.85
NDUFS3O75489 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.35■□□□□ 0.85
NDUFS3O75489 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NDUFS3O75489 MFSD11-216ENST00000590393 1141 ntBASIC20.35■□□□□ 0.85
NDUFS3O75489 AC013268.1-206ENST00000638368 961 ntBASIC20.35■□□□□ 0.85
NDUFS3O75489 AC112229.1-201ENST00000639295 961 ntBASIC20.35■□□□□ 0.85
NDUFS3O75489 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFS3O75489 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
NDUFS3O75489 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.35■□□□□ 0.85
NDUFS3O75489 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFS3O75489 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFS3O75489 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.35■□□□□ 0.85
NDUFS3O75489 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFS3O75489 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFS3O75489 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFS3O75489 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFS3O75489 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
NDUFS3O75489 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.34■□□□□ 0.85
NDUFS3O75489 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFS3O75489 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFS3O75489 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NDUFS3O75489 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NDUFS3O75489 AC092667.1-201ENST00000434301 2586 ntBASIC20.34■□□□□ 0.85
NDUFS3O75489 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFS3O75489 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFS3O75489 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms