Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.4■□□□□ 0.7
SCN2BO60939 DUX4L2-201ENST00000561772 1275 ntBASIC19.4■□□□□ 0.7
SCN2BO60939 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.4■□□□□ 0.7
SCN2BO60939 AP001160.3-201ENST00000601484 763 ntBASIC19.4■□□□□ 0.7
SCN2BO60939 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
SCN2BO60939 DUX4L6-201ENST00000626483 1275 ntBASIC19.4■□□□□ 0.7
SCN2BO60939 DUX4L1-201ENST00000627662 1275 ntBASIC19.4■□□□□ 0.7
SCN2BO60939 DUX4L8-201ENST00000629013 1275 ntBASIC19.4■□□□□ 0.7
SCN2BO60939 DUX4L3-201ENST00000630187 1275 ntBASIC19.4■□□□□ 0.7
SCN2BO60939 DUX4L7-201ENST00000630678 1275 ntBASIC19.4■□□□□ 0.7
SCN2BO60939 DUX4L5-201ENST00000630834 1275 ntBASIC19.4■□□□□ 0.7
SCN2BO60939 AC099778.1-201ENST00000568593 1911 ntBASIC19.4■□□□□ 0.7
SCN2BO60939 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN2BO60939 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SCN2BO60939 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN2BO60939 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN2BO60939 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN2BO60939 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN2BO60939 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.4■□□□□ 0.7
SCN2BO60939 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.4■□□□□ 0.7
SCN2BO60939 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SCN2BO60939 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCN2BO60939 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.39■□□□□ 0.7
SCN2BO60939 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCN2BO60939 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.7
SCN2BO60939 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCN2BO60939 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN2BO60939 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN2BO60939 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN2BO60939 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.39■□□□□ 0.69
SCN2BO60939 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SCN2BO60939 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.39■□□□□ 0.69
SCN2BO60939 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.39■□□□□ 0.69
SCN2BO60939 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCN2BO60939 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.39■□□□□ 0.69
SCN2BO60939 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.39■□□□□ 0.69
SCN2BO60939 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.39■□□□□ 0.69
SCN2BO60939 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN2BO60939 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN2BO60939 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.39■□□□□ 0.69
SCN2BO60939 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN2BO60939 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SCN2BO60939 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCN2BO60939 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCN2BO60939 AC112907.3-201ENST00000577781 2400 ntBASIC19.39■□□□□ 0.69
SCN2BO60939 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.38■□□□□ 0.69
SCN2BO60939 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN2BO60939 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCN2BO60939 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.38■□□□□ 0.69
SCN2BO60939 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN2BO60939 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCN2BO60939 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN2BO60939 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN2BO60939 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCN2BO60939 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.38■□□□□ 0.69
SCN2BO60939 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.38■□□□□ 0.69
SCN2BO60939 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.38■□□□□ 0.69
SCN2BO60939 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SCN2BO60939 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.38■□□□□ 0.69
SCN2BO60939 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.38■□□□□ 0.69
SCN2BO60939 AC120498.10-201ENST00000621827 505 ntBASIC19.38■□□□□ 0.69
SCN2BO60939 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCN2BO60939 PCDHAC2-203ENST00000615316 3011 ntBASIC19.38■□□□□ 0.69
SCN2BO60939 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.37■□□□□ 0.69
SCN2BO60939 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN2BO60939 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SCN2BO60939 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.37■□□□□ 0.69
SCN2BO60939 AC116050.2-201ENST00000612102 1779 ntBASIC19.37■□□□□ 0.69
SCN2BO60939 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SCN2BO60939 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN2BO60939 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SCN2BO60939 MIR2861-201ENST00000636310 90 ntBASIC19.37■□□□□ 0.69
SCN2BO60939 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SCN2BO60939 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN2BO60939 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN2BO60939 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SCN2BO60939 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SCN2BO60939 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN2BO60939 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.37■□□□□ 0.69
SCN2BO60939 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN2BO60939 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCN2BO60939 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SCN2BO60939 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN2BO60939 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SCN2BO60939 AFG3L1P-217ENST00000557444 2447 ntBASIC19.36■□□□□ 0.69
SCN2BO60939 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN2BO60939 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN2BO60939 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SCN2BO60939 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN2BO60939 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.36■□□□□ 0.69
SCN2BO60939 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.36■□□□□ 0.69
SCN2BO60939 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN2BO60939 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.36■□□□□ 0.69
SCN2BO60939 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN2BO60939 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCN2BO60939 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.36■□□□□ 0.69
SCN2BO60939 YBX1P1-201ENST00000445822 960 ntBASIC19.36■□□□□ 0.69
SCN2BO60939 KRT18P20-201ENST00000548986 1279 ntBASIC19.36■□□□□ 0.69
SCN2BO60939 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCN2BO60939 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms