Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
OPHN1O60890 AC138907.5-202ENST00000569484 235 ntBASIC21.28■■□□□ 1
OPHN1O60890 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
OPHN1O60890 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.28■■□□□ 1
OPHN1O60890 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.28■■□□□ 1
OPHN1O60890 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
OPHN1O60890 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
OPHN1O60890 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
OPHN1O60890 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.28■■□□□ 1
OPHN1O60890 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.28■■□□□ 1
OPHN1O60890 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
OPHN1O60890 RNF165-205ENST00000588679 2904 ntBASIC21.28■■□□□ 1
OPHN1O60890 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.27■■□□□ 1
OPHN1O60890 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.27■■□□□ 1
OPHN1O60890 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
OPHN1O60890 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
OPHN1O60890 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
OPHN1O60890 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.27■■□□□ 1
OPHN1O60890 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.27■■□□□ 1
OPHN1O60890 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
OPHN1O60890 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
OPHN1O60890 AF201337.1-201ENST00000520239 748 ntBASIC21.27■■□□□ 1
OPHN1O60890 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.27■■□□□ 1
OPHN1O60890 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
OPHN1O60890 MYCNOS-205ENST00000641950 531 ntBASIC21.27■■□□□ 1
OPHN1O60890 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.27■■□□□ 1
OPHN1O60890 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
OPHN1O60890 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
OPHN1O60890 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
OPHN1O60890 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.27■□□□□ 0.99
OPHN1O60890 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
OPHN1O60890 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.26■□□□□ 0.99
OPHN1O60890 AC006128.1-201ENST00000624704 1661 ntBASIC21.26■□□□□ 0.99
OPHN1O60890 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
OPHN1O60890 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
OPHN1O60890 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.26■□□□□ 0.99
OPHN1O60890 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
OPHN1O60890 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.26■□□□□ 0.99
OPHN1O60890 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
OPHN1O60890 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
OPHN1O60890 PLK5-205ENST00000642079 1969 ntBASIC21.26■□□□□ 0.99
OPHN1O60890 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.26■□□□□ 0.99
OPHN1O60890 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
OPHN1O60890 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
OPHN1O60890 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.25■□□□□ 0.99
OPHN1O60890 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.25■□□□□ 0.99
OPHN1O60890 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
OPHN1O60890 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
OPHN1O60890 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
OPHN1O60890 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
OPHN1O60890 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
OPHN1O60890 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.25■□□□□ 0.99
OPHN1O60890 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
OPHN1O60890 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
OPHN1O60890 AC093827.2-201ENST00000512654 315 ntBASIC21.25■□□□□ 0.99
OPHN1O60890 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
OPHN1O60890 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.25■□□□□ 0.99
OPHN1O60890 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
OPHN1O60890 AC121338.2-201ENST00000622535 1744 ntBASIC21.25■□□□□ 0.99
OPHN1O60890 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.25■□□□□ 0.99
OPHN1O60890 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
OPHN1O60890 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
OPHN1O60890 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
OPHN1O60890 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.25■□□□□ 0.99
OPHN1O60890 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
OPHN1O60890 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
OPHN1O60890 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OPHN1O60890 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
OPHN1O60890 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OPHN1O60890 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.24■□□□□ 0.99
OPHN1O60890 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.24■□□□□ 0.99
OPHN1O60890 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.24■□□□□ 0.99
OPHN1O60890 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OPHN1O60890 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OPHN1O60890 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
OPHN1O60890 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OPHN1O60890 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
OPHN1O60890 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
OPHN1O60890 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.24■□□□□ 0.99
OPHN1O60890 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.24■□□□□ 0.99
OPHN1O60890 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
OPHN1O60890 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
OPHN1O60890 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
OPHN1O60890 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.24■□□□□ 0.99
OPHN1O60890 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
OPHN1O60890 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
OPHN1O60890 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.24■□□□□ 0.99
OPHN1O60890 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
OPHN1O60890 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.23■□□□□ 0.99
OPHN1O60890 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
OPHN1O60890 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
OPHN1O60890 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
OPHN1O60890 AC092667.1-201ENST00000434301 2586 ntBASIC21.23■□□□□ 0.99
OPHN1O60890 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
OPHN1O60890 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
OPHN1O60890 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
OPHN1O60890 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
OPHN1O60890 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.23■□□□□ 0.99
OPHN1O60890 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
OPHN1O60890 AC073210.2-201ENST00000430369 194 ntBASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms