Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC24.03■■□□□ 1.44
CTNND1O60716 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CTNND1O60716 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CTNND1O60716 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.03■■□□□ 1.44
CTNND1O60716 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CTNND1O60716 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CTNND1O60716 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CTNND1O60716 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC24.03■■□□□ 1.44
CTNND1O60716 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CTNND1O60716 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC24.03■■□□□ 1.44
CTNND1O60716 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CTNND1O60716 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTNND1O60716 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTNND1O60716 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTNND1O60716 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CTNND1O60716 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CTNND1O60716 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CTNND1O60716 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CTNND1O60716 LY6E-205ENST00000519611 635 ntTSL 3 BASIC24.02■■□□□ 1.44
CTNND1O60716 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC24.02■■□□□ 1.44
CTNND1O60716 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CTNND1O60716 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC24.02■■□□□ 1.44
CTNND1O60716 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.02■■□□□ 1.44
CTNND1O60716 AC124016.1-201ENST00000609552 612 ntBASIC24.02■■□□□ 1.44
CTNND1O60716 AC073912.3-201ENST00000624414 853 ntBASIC24.02■■□□□ 1.44
CTNND1O60716 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
CTNND1O60716 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CTNND1O60716 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTNND1O60716 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.01■■□□□ 1.43
CTNND1O60716 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
CTNND1O60716 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC24.01■■□□□ 1.43
CTNND1O60716 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CTNND1O60716 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CTNND1O60716 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CTNND1O60716 SERF2-207ENST00000409614 582 ntTSL 2 BASIC24.01■■□□□ 1.43
CTNND1O60716 AC012618.2-201ENST00000428058 849 ntBASIC24.01■■□□□ 1.43
CTNND1O60716 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC24.01■■□□□ 1.43
CTNND1O60716 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
CTNND1O60716 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CTNND1O60716 GUSBP5-202ENST00000510805 1989 ntBASIC24.01■■□□□ 1.43
CTNND1O60716 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CTNND1O60716 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CTNND1O60716 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24■■□□□ 1.43
CTNND1O60716 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24■■□□□ 1.43
CTNND1O60716 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC24■■□□□ 1.43
CTNND1O60716 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24■■□□□ 1.43
CTNND1O60716 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CTNND1O60716 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24■■□□□ 1.43
CTNND1O60716 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
CTNND1O60716 MDFI-202ENST00000373050 809 ntTSL 2 BASIC24■■□□□ 1.43
CTNND1O60716 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC24■■□□□ 1.43
CTNND1O60716 GXYLT1P3-201ENST00000453058 1193 ntBASIC24■■□□□ 1.43
CTNND1O60716 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC24■■□□□ 1.43
CTNND1O60716 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CTNND1O60716 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC24■■□□□ 1.43
CTNND1O60716 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC24■■□□□ 1.43
CTNND1O60716 AC233702.5-201ENST00000584107 538 ntBASIC24■■□□□ 1.43
CTNND1O60716 AC006557.6-201ENST00000623071 864 ntBASIC24■■□□□ 1.43
CTNND1O60716 AL023875.1-201ENST00000640777 796 ntBASIC24■■□□□ 1.43
CTNND1O60716 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CTNND1O60716 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CTNND1O60716 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CTNND1O60716 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CTNND1O60716 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24■■□□□ 1.43
CTNND1O60716 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.99■■□□□ 1.43
CTNND1O60716 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.99■■□□□ 1.43
CTNND1O60716 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTNND1O60716 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTNND1O60716 RPS2P55-201ENST00000397318 883 ntBASIC23.99■■□□□ 1.43
CTNND1O60716 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.99■■□□□ 1.43
CTNND1O60716 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTNND1O60716 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
CTNND1O60716 AC107956.1-201ENST00000494359 873 ntBASIC23.99■■□□□ 1.43
CTNND1O60716 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.99■■□□□ 1.43
CTNND1O60716 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTNND1O60716 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTNND1O60716 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CTNND1O60716 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CTNND1O60716 AL390719.1-204ENST00000412397 1219 ntBASIC23.98■■□□□ 1.43
CTNND1O60716 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CTNND1O60716 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CTNND1O60716 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CTNND1O60716 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CTNND1O60716 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CTNND1O60716 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.98■■□□□ 1.43
CTNND1O60716 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.98■■□□□ 1.43
CTNND1O60716 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.98■■□□□ 1.43
CTNND1O60716 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.98■■□□□ 1.43
CTNND1O60716 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.98■■□□□ 1.43
CTNND1O60716 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.98■■□□□ 1.43
CTNND1O60716 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CTNND1O60716 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.98■■□□□ 1.43
CTNND1O60716 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
CTNND1O60716 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.98■■□□□ 1.43
CTNND1O60716 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.98■■□□□ 1.43
CTNND1O60716 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CTNND1O60716 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
CTNND1O60716 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CTNND1O60716 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CTNND1O60716 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms