Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RN7SL471P-201ENST00000580476 299 ntBASIC20.29■□□□□ 0.84
PCDHGA12O60330 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA12O60330 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA12O60330 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA12O60330 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA12O60330 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGA12O60330 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PCDHGA12O60330 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA12O60330 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHGA12O60330 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGA12O60330 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA12O60330 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA12O60330 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGA12O60330 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA12O60330 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCDHGA12O60330 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA12O60330 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA12O60330 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHGA12O60330 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGA12O60330 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.28■□□□□ 0.84
PCDHGA12O60330 C1QBPP2-201ENST00000528754 825 ntBASIC20.28■□□□□ 0.84
PCDHGA12O60330 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA12O60330 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA12O60330 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHGA12O60330 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHGA12O60330 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHGA12O60330 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGA12O60330 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA12O60330 AC026310.3-201ENST00000625186 2373 ntBASIC20.28■□□□□ 0.84
PCDHGA12O60330 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA12O60330 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA12O60330 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA12O60330 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PCDHGA12O60330 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PCDHGA12O60330 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA12O60330 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA12O60330 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA12O60330 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA12O60330 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA12O60330 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDHGA12O60330 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PCDHGA12O60330 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA12O60330 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA12O60330 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGA12O60330 SLC25A24-204ENST00000569674 2357 ntBASIC20.27■□□□□ 0.83
PCDHGA12O60330 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
PCDHGA12O60330 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.27■□□□□ 0.83
PCDHGA12O60330 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA12O60330 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA12O60330 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PCDHGA12O60330 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDHGA12O60330 MIR4497-201ENST00000583208 89 ntBASIC20.26■□□□□ 0.83
PCDHGA12O60330 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHGA12O60330 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA12O60330 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA12O60330 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGA12O60330 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHGA12O60330 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA12O60330 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHGA12O60330 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDHGA12O60330 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGA12O60330 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA12O60330 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA12O60330 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PCDHGA12O60330 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA12O60330 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA12O60330 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA12O60330 AC007322.3-201ENST00000426526 701 ntBASIC20.25■□□□□ 0.83
PCDHGA12O60330 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHGA12O60330 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.25■□□□□ 0.83
PCDHGA12O60330 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGA12O60330 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGA12O60330 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
PCDHGA12O60330 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGA12O60330 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PCDHGA12O60330 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDHGA12O60330 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA12O60330 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA12O60330 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA12O60330 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PCDHGA12O60330 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA12O60330 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA12O60330 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCDHGA12O60330 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA12O60330 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA12O60330 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA12O60330 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA12O60330 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGA12O60330 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGA12O60330 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHGA12O60330 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA12O60330 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGA12O60330 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHGA12O60330 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHGA12O60330 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHGA12O60330 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.24■□□□□ 0.83
PCDHGA12O60330 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHGA12O60330 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA12O60330 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA12O60330 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms