Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.65■■□□□ 1.06
CLDN5O00501 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN5O00501 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN5O00501 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CLDN5O00501 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN5O00501 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.64■■□□□ 1.05
CLDN5O00501 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN5O00501 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.64■■□□□ 1.05
CLDN5O00501 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CLDN5O00501 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.64■■□□□ 1.05
CLDN5O00501 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.64■■□□□ 1.05
CLDN5O00501 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.64■■□□□ 1.05
CLDN5O00501 AC105020.6-201ENST00000621523 1217 ntBASIC21.64■■□□□ 1.05
CLDN5O00501 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN5O00501 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CLDN5O00501 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
CLDN5O00501 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN5O00501 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN5O00501 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN5O00501 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN5O00501 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN5O00501 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN5O00501 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CLDN5O00501 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN5O00501 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN5O00501 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN5O00501 CD99P1-205ENST00000527459 561 ntBASIC21.63■■□□□ 1.05
CLDN5O00501 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.63■■□□□ 1.05
CLDN5O00501 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.63■■□□□ 1.05
CLDN5O00501 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN5O00501 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN5O00501 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN5O00501 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN5O00501 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN5O00501 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.62■■□□□ 1.05
CLDN5O00501 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN5O00501 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.62■■□□□ 1.05
CLDN5O00501 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.62■■□□□ 1.05
CLDN5O00501 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CLDN5O00501 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN5O00501 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.62■■□□□ 1.05
CLDN5O00501 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN5O00501 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.62■■□□□ 1.05
CLDN5O00501 AL356652.1-201ENST00000615962 565 ntBASIC21.62■■□□□ 1.05
CLDN5O00501 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CLDN5O00501 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN5O00501 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN5O00501 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN5O00501 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN5O00501 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN5O00501 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CLDN5O00501 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.62■■□□□ 1.05
CLDN5O00501 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CLDN5O00501 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN5O00501 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.61■■□□□ 1.05
CLDN5O00501 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN5O00501 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CLDN5O00501 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN5O00501 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN5O00501 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN5O00501 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN5O00501 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CLDN5O00501 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN5O00501 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
CLDN5O00501 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CLDN5O00501 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN5O00501 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN5O00501 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
CLDN5O00501 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CLDN5O00501 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.6■■□□□ 1.05
CLDN5O00501 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.6■■□□□ 1.05
CLDN5O00501 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.6■■□□□ 1.05
CLDN5O00501 RNA5SP413-201ENST00000516373 109 ntBASIC21.6■■□□□ 1.05
CLDN5O00501 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.6■■□□□ 1.05
CLDN5O00501 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN5O00501 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN5O00501 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.6■■□□□ 1.05
CLDN5O00501 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN5O00501 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.6■■□□□ 1.05
CLDN5O00501 MIR2861-201ENST00000636310 90 ntBASIC21.6■■□□□ 1.05
CLDN5O00501 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.6■■□□□ 1.05
CLDN5O00501 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN5O00501 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN5O00501 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN5O00501 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN5O00501 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.59■■□□□ 1.05
CLDN5O00501 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN5O00501 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.59■■□□□ 1.05
CLDN5O00501 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN5O00501 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.59■■□□□ 1.05
CLDN5O00501 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN5O00501 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CLDN5O00501 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN5O00501 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN5O00501 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.59■■□□□ 1.05
CLDN5O00501 MIR4651-201ENST00000582622 73 ntBASIC21.59■■□□□ 1.05
CLDN5O00501 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN5O00501 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CLDN5O00501 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN5O00501 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms