Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
O00370 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
O00370 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
O00370 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
O00370 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
O00370 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
O00370 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
O00370 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
O00370 RARRES2P4-201ENST00000514074 484 ntBASIC21.82■■□□□ 1.08
O00370 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.82■■□□□ 1.08
O00370 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
O00370 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.82■■□□□ 1.08
O00370 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
O00370 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
O00370 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.82■■□□□ 1.08
O00370 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
O00370 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
O00370 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
O00370 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.81■■□□□ 1.08
O00370 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
O00370 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
O00370 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.81■■□□□ 1.08
O00370 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.81■■□□□ 1.08
O00370 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.81■■□□□ 1.08
O00370 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.81■■□□□ 1.08
O00370 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
O00370 MIR663A-201ENST00000385250 93 ntBASIC21.81■■□□□ 1.08
O00370 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
O00370 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.81■■□□□ 1.08
O00370 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.81■■□□□ 1.08
O00370 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
O00370 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
O00370 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
O00370 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
O00370 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
O00370 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
O00370 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
O00370 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
O00370 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.8■■□□□ 1.08
O00370 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
O00370 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
O00370 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.8■■□□□ 1.08
O00370 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.8■■□□□ 1.08
O00370 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
O00370 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
O00370 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
O00370 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.8■■□□□ 1.08
O00370 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.8■■□□□ 1.08
O00370 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
O00370 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
O00370 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
O00370 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
O00370 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
O00370 LINC01006-201ENST00000333319 2292 ntBASIC21.8■■□□□ 1.08
O00370 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
O00370 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.8■■□□□ 1.08
O00370 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.8■■□□□ 1.08
O00370 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
O00370 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
O00370 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
O00370 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
O00370 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
O00370 AC027702.1-201ENST00000563810 1770 ntBASIC21.79■■□□□ 1.08
O00370 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
O00370 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
O00370 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.79■■□□□ 1.08
O00370 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.79■■□□□ 1.08
O00370 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.79■■□□□ 1.08
O00370 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
O00370 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.79■■□□□ 1.08
O00370 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
O00370 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.79■■□□□ 1.08
O00370 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.79■■□□□ 1.08
O00370 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
O00370 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.79■■□□□ 1.08
O00370 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.79■■□□□ 1.08
O00370 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
O00370 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
O00370 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
O00370 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
O00370 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
O00370 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
O00370 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
O00370 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
O00370 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
O00370 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
O00370 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
O00370 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
O00370 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
O00370 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.78■■□□□ 1.08
O00370 AC069236.1-201ENST00000604339 616 ntBASIC21.78■■□□□ 1.08
O00370 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
O00370 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
O00370 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
O00370 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
O00370 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.78■■□□□ 1.08
O00370 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
O00370 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
O00370 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
O00370 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms