Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF25A6NGN4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF25A6NGN4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.2■□□□□ 0.66
PRAMEF25A6NGN4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PRAMEF25A6NGN4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PRAMEF25A6NGN4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEF25A6NGN4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.2■□□□□ 0.66
PRAMEF25A6NGN4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.2■□□□□ 0.66
PRAMEF25A6NGN4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
PRAMEF25A6NGN4 AFG3L1P-217ENST00000557444 2447 ntBASIC19.2■□□□□ 0.66
PRAMEF25A6NGN4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 MFSD11-216ENST00000590393 1141 ntBASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.19■□□□□ 0.66
PRAMEF25A6NGN4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 PKD1P6-201ENST00000343738 4769 ntBASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 AC011767.1-201ENST00000617410 1153 ntBASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 AL162377.1-201ENST00000618844 1793 ntBASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEF25A6NGN4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 AL512408.1-201ENST00000569378 2000 ntBASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.17■□□□□ 0.66
PRAMEF25A6NGN4 AL121603.2-201ENST00000557373 2117 ntBASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 AC112907.3-201ENST00000577781 2400 ntBASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.16■□□□□ 0.66
PRAMEF25A6NGN4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms