Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 PRKY-204ENST00000533551 1019 ntBASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 AL356652.1-201ENST00000615962 565 ntBASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.3■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 AL355075.4-201ENST00000554988 638 ntBASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.28■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.27■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.27■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.27■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.27■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 RARRES2P10-201ENST00000564312 460 ntBASIC20.27■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSANTD3-TMEFF1A0A0A6YYJ0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSANTD3-TMEFF1A0A0A6YYJ0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms