Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV9-1A0A075B6T8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV9-1A0A075B6T8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV9-1A0A075B6T8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 AC090340.1-201ENST00000620778 4980 ntBASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV9-1A0A075B6T8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV9-1A0A075B6T8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms