Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
CSNK1G3Q9Y6M4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 UBE2SP1-201ENST00000450587 669 ntBASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CSNK1G3Q9Y6M4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CSNK1G3Q9Y6M4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 PGM5P4-201ENST00000421970 445 ntBASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 RPS2P4-201ENST00000476944 856 ntBASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CSNK1G3Q9Y6M4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CSNK1G3Q9Y6M4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CSNK1G3Q9Y6M4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 AL359736.2-201ENST00000621992 437 ntBASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 AC087633.2-202ENST00000565166 1439 ntBASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CSNK1G3Q9Y6M4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms