Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
YIPF1Q9Y548 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.52■■□□□ 1.03
YIPF1Q9Y548 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
YIPF1Q9Y548 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
YIPF1Q9Y548 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
YIPF1Q9Y548 AC012676.1-201ENST00000574705 1949 ntBASIC21.51■■□□□ 1.03
YIPF1Q9Y548 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
YIPF1Q9Y548 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.51■■□□□ 1.03
YIPF1Q9Y548 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
YIPF1Q9Y548 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
YIPF1Q9Y548 KRT17P3-201ENST00000420566 1262 ntBASIC21.51■■□□□ 1.03
YIPF1Q9Y548 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
YIPF1Q9Y548 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.51■■□□□ 1.03
YIPF1Q9Y548 AL359736.2-201ENST00000621992 437 ntBASIC21.51■■□□□ 1.03
YIPF1Q9Y548 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
YIPF1Q9Y548 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.51■■□□□ 1.03
YIPF1Q9Y548 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.51■■□□□ 1.03
YIPF1Q9Y548 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
YIPF1Q9Y548 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
YIPF1Q9Y548 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.5■■□□□ 1.03
YIPF1Q9Y548 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
YIPF1Q9Y548 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.5■■□□□ 1.03
YIPF1Q9Y548 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.5■■□□□ 1.03
YIPF1Q9Y548 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.5■■□□□ 1.03
YIPF1Q9Y548 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.5■■□□□ 1.03
YIPF1Q9Y548 AC069544.1-201ENST00000609399 999 ntBASIC21.5■■□□□ 1.03
YIPF1Q9Y548 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
YIPF1Q9Y548 AC133561.1-201ENST00000568600 2415 ntBASIC21.5■■□□□ 1.03
YIPF1Q9Y548 Z98882.1-201ENST00000622160 2253 ntBASIC21.5■■□□□ 1.03
YIPF1Q9Y548 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.5■■□□□ 1.03
YIPF1Q9Y548 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
YIPF1Q9Y548 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.5■■□□□ 1.03
YIPF1Q9Y548 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
YIPF1Q9Y548 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
YIPF1Q9Y548 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
YIPF1Q9Y548 FBXW4P1-201ENST00000426721 2239 ntBASIC21.49■■□□□ 1.03
YIPF1Q9Y548 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.49■■□□□ 1.03
YIPF1Q9Y548 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.49■■□□□ 1.03
YIPF1Q9Y548 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
YIPF1Q9Y548 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
YIPF1Q9Y548 EP400NL-214ENST00000641289 2402 ntBASIC21.48■■□□□ 1.03
YIPF1Q9Y548 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.48■■□□□ 1.03
YIPF1Q9Y548 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
YIPF1Q9Y548 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
YIPF1Q9Y548 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
YIPF1Q9Y548 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
YIPF1Q9Y548 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
YIPF1Q9Y548 C1QBPP2-201ENST00000528754 825 ntBASIC21.48■■□□□ 1.03
YIPF1Q9Y548 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.48■■□□□ 1.03
YIPF1Q9Y548 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.48■■□□□ 1.03
YIPF1Q9Y548 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.48■■□□□ 1.03
YIPF1Q9Y548 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
YIPF1Q9Y548 AC011484.1-201ENST00000377652 1995 ntBASIC21.48■■□□□ 1.03
YIPF1Q9Y548 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
YIPF1Q9Y548 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
YIPF1Q9Y548 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
YIPF1Q9Y548 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 POM121L13P-201ENST00000422362 380 ntBASIC21.47■■□□□ 1.03
YIPF1Q9Y548 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
YIPF1Q9Y548 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms