Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
RTCBQ9Y3I0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTCBQ9Y3I0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTCBQ9Y3I0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.09■■□□□ 1.77
RTCBQ9Y3I0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTCBQ9Y3I0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RTCBQ9Y3I0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTCBQ9Y3I0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC26.09■■□□□ 1.77
RTCBQ9Y3I0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RTCBQ9Y3I0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTCBQ9Y3I0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTCBQ9Y3I0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RTCBQ9Y3I0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.09■■□□□ 1.77
RTCBQ9Y3I0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RTCBQ9Y3I0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC26.08■■□□□ 1.77
RTCBQ9Y3I0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC26.08■■□□□ 1.77
RTCBQ9Y3I0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RTCBQ9Y3I0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RTCBQ9Y3I0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
RTCBQ9Y3I0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RTCBQ9Y3I0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
RTCBQ9Y3I0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC26.08■■□□□ 1.77
RTCBQ9Y3I0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RTCBQ9Y3I0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
RTCBQ9Y3I0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
RTCBQ9Y3I0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC26.07■■□□□ 1.76
RTCBQ9Y3I0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
RTCBQ9Y3I0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC26.07■■□□□ 1.76
RTCBQ9Y3I0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RTCBQ9Y3I0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC26.07■■□□□ 1.76
RTCBQ9Y3I0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RTCBQ9Y3I0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC26.07■■□□□ 1.76
RTCBQ9Y3I0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTCBQ9Y3I0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTCBQ9Y3I0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC26.06■■□□□ 1.76
RTCBQ9Y3I0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC26.06■■□□□ 1.76
RTCBQ9Y3I0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC26.06■■□□□ 1.76
RTCBQ9Y3I0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTCBQ9Y3I0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC26.06■■□□□ 1.76
RTCBQ9Y3I0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC26.06■■□□□ 1.76
RTCBQ9Y3I0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.06■■□□□ 1.76
RTCBQ9Y3I0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC26.06■■□□□ 1.76
RTCBQ9Y3I0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RTCBQ9Y3I0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTCBQ9Y3I0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 AL353708.3-201ENST00000610272 989 ntBASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 AC026471.5-201ENST00000615068 467 ntBASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 AL356652.1-201ENST00000615962 565 ntBASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTCBQ9Y3I0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 AL445228.2-201ENST00000605589 952 ntBASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 CD177P1-201ENST00000606252 935 ntBASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RTCBQ9Y3I0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTCBQ9Y3I0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
RTCBQ9Y3I0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTCBQ9Y3I0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RTCBQ9Y3I0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RTCBQ9Y3I0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTCBQ9Y3I0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RTCBQ9Y3I0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC26.03■■□□□ 1.76
RTCBQ9Y3I0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC26.03■■□□□ 1.76
RTCBQ9Y3I0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms