Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AL356652.1-201ENST00000615962 565 ntBASIC26.94■■□□□ 1.9
SPG7Q9UQ90 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SPG7Q9UQ90 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SPG7Q9UQ90 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SPG7Q9UQ90 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.93■■□□□ 1.9
SPG7Q9UQ90 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
SPG7Q9UQ90 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPG7Q9UQ90 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SPG7Q9UQ90 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SPG7Q9UQ90 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SPG7Q9UQ90 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.91■■□□□ 1.9
SPG7Q9UQ90 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SPG7Q9UQ90 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SPG7Q9UQ90 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SPG7Q9UQ90 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SPG7Q9UQ90 LY6E-205ENST00000519611 635 ntTSL 3 BASIC26.91■■□□□ 1.9
SPG7Q9UQ90 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC26.91■■□□□ 1.9
SPG7Q9UQ90 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SPG7Q9UQ90 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SPG7Q9UQ90 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC26.91■■□□□ 1.9
SPG7Q9UQ90 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC26.91■■□□□ 1.9
SPG7Q9UQ90 GUSBP5-202ENST00000510805 1989 ntBASIC26.91■■□□□ 1.9
SPG7Q9UQ90 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
SPG7Q9UQ90 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
SPG7Q9UQ90 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.9■■□□□ 1.9
SPG7Q9UQ90 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SPG7Q9UQ90 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
SPG7Q9UQ90 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SPG7Q9UQ90 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC26.9■■□□□ 1.9
SPG7Q9UQ90 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SPG7Q9UQ90 AC133681.1-201ENST00000465482 601 ntBASIC26.9■■□□□ 1.9
SPG7Q9UQ90 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
SPG7Q9UQ90 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.9■■□□□ 1.9
SPG7Q9UQ90 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
SPG7Q9UQ90 AC124016.1-201ENST00000609552 612 ntBASIC26.9■■□□□ 1.9
SPG7Q9UQ90 AC006557.6-201ENST00000623071 864 ntBASIC26.9■■□□□ 1.9
SPG7Q9UQ90 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SPG7Q9UQ90 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SPG7Q9UQ90 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC26.9■■□□□ 1.9
SPG7Q9UQ90 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC26.89■■□□□ 1.9
SPG7Q9UQ90 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SPG7Q9UQ90 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
SPG7Q9UQ90 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SPG7Q9UQ90 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SPG7Q9UQ90 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SPG7Q9UQ90 MDFI-202ENST00000373050 809 ntTSL 2 BASIC26.89■■□□□ 1.9
SPG7Q9UQ90 SERF2-207ENST00000409614 582 ntTSL 2 BASIC26.89■■□□□ 1.9
SPG7Q9UQ90 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC26.89■■□□□ 1.9
SPG7Q9UQ90 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
SPG7Q9UQ90 AL023875.1-201ENST00000640777 796 ntBASIC26.89■■□□□ 1.9
SPG7Q9UQ90 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SPG7Q9UQ90 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.89■■□□□ 1.89
SPG7Q9UQ90 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
SPG7Q9UQ90 AC012618.2-201ENST00000428058 849 ntBASIC26.88■■□□□ 1.89
SPG7Q9UQ90 GXYLT1P3-201ENST00000453058 1193 ntBASIC26.88■■□□□ 1.89
SPG7Q9UQ90 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms