Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 LINC01521-201ENST00000504184 1943 ntBASIC16.97■□□□□ 0.31
CALYQ9NYX4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CALYQ9NYX4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.97■□□□□ 0.31
CALYQ9NYX4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CALYQ9NYX4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.97■□□□□ 0.31
CALYQ9NYX4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CALYQ9NYX4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CALYQ9NYX4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CALYQ9NYX4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.96■□□□□ 0.31
CALYQ9NYX4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.96■□□□□ 0.31
CALYQ9NYX4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CALYQ9NYX4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CALYQ9NYX4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CALYQ9NYX4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.96■□□□□ 0.31
CALYQ9NYX4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CALYQ9NYX4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CALYQ9NYX4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.96■□□□□ 0.31
CALYQ9NYX4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
CALYQ9NYX4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CALYQ9NYX4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CALYQ9NYX4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CALYQ9NYX4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CALYQ9NYX4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.96■□□□□ 0.31
CALYQ9NYX4 LINC01006-201ENST00000333319 2292 ntBASIC16.96■□□□□ 0.31
CALYQ9NYX4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CALYQ9NYX4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CALYQ9NYX4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CALYQ9NYX4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CALYQ9NYX4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.96■□□□□ 0.31
CALYQ9NYX4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CALYQ9NYX4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CALYQ9NYX4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CALYQ9NYX4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CALYQ9NYX4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CALYQ9NYX4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CALYQ9NYX4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CALYQ9NYX4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.96■□□□□ 0.3
CALYQ9NYX4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.96■□□□□ 0.3
CALYQ9NYX4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.95■□□□□ 0.3
CALYQ9NYX4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CALYQ9NYX4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CALYQ9NYX4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CALYQ9NYX4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CALYQ9NYX4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.95■□□□□ 0.3
CALYQ9NYX4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CALYQ9NYX4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CALYQ9NYX4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CALYQ9NYX4 CDV3P1-201ENST00000471403 739 ntBASIC16.95■□□□□ 0.3
CALYQ9NYX4 AL162430.1-201ENST00000480705 870 ntBASIC16.95■□□□□ 0.3
CALYQ9NYX4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CALYQ9NYX4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CALYQ9NYX4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CALYQ9NYX4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CALYQ9NYX4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CALYQ9NYX4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CALYQ9NYX4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CALYQ9NYX4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CALYQ9NYX4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.95■□□□□ 0.3
CALYQ9NYX4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CALYQ9NYX4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CALYQ9NYX4 AC073314.1-201ENST00000568729 2216 ntBASIC16.94■□□□□ 0.3
CALYQ9NYX4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CALYQ9NYX4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CALYQ9NYX4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CALYQ9NYX4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CALYQ9NYX4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CALYQ9NYX4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.94■□□□□ 0.3
CALYQ9NYX4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CALYQ9NYX4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CALYQ9NYX4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CALYQ9NYX4 TERF1P5-201ENST00000477545 1207 ntBASIC16.94■□□□□ 0.3
CALYQ9NYX4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.94■□□□□ 0.3
CALYQ9NYX4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.94■□□□□ 0.3
CALYQ9NYX4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CALYQ9NYX4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.94■□□□□ 0.3
CALYQ9NYX4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CALYQ9NYX4 AP005212.1-201ENST00000581547 1997 ntBASIC16.94■□□□□ 0.3
CALYQ9NYX4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.94■□□□□ 0.3
CALYQ9NYX4 GABARAPL3-202ENST00000624044 1851 ntBASIC16.94■□□□□ 0.3
CALYQ9NYX4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.94■□□□□ 0.3
CALYQ9NYX4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CALYQ9NYX4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.94■□□□□ 0.3
CALYQ9NYX4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CALYQ9NYX4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CALYQ9NYX4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.93■□□□□ 0.3
CALYQ9NYX4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CALYQ9NYX4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CALYQ9NYX4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.93■□□□□ 0.3
CALYQ9NYX4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CALYQ9NYX4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CALYQ9NYX4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.93■□□□□ 0.3
CALYQ9NYX4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.93■□□□□ 0.3
CALYQ9NYX4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CALYQ9NYX4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CALYQ9NYX4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CALYQ9NYX4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CALYQ9NYX4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CALYQ9NYX4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CALYQ9NYX4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CALYQ9NYX4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms