Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
BLOC1S4Q9NUP1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
BLOC1S4Q9NUP1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.88■■□□□ 1.25
BLOC1S4Q9NUP1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
BLOC1S4Q9NUP1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
BLOC1S4Q9NUP1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
BLOC1S4Q9NUP1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
BLOC1S4Q9NUP1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.87■■□□□ 1.25
BLOC1S4Q9NUP1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
BLOC1S4Q9NUP1 AC007322.1-201ENST00000426983 750 ntBASIC22.87■■□□□ 1.25
BLOC1S4Q9NUP1 CYP2T1P-201ENST00000432607 1285 ntBASIC22.87■■□□□ 1.25
BLOC1S4Q9NUP1 RARRES2P4-201ENST00000514074 484 ntBASIC22.87■■□□□ 1.25
BLOC1S4Q9NUP1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
BLOC1S4Q9NUP1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
BLOC1S4Q9NUP1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
BLOC1S4Q9NUP1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
BLOC1S4Q9NUP1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
BLOC1S4Q9NUP1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
BLOC1S4Q9NUP1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
BLOC1S4Q9NUP1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
BLOC1S4Q9NUP1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
BLOC1S4Q9NUP1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
BLOC1S4Q9NUP1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
BLOC1S4Q9NUP1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
BLOC1S4Q9NUP1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.86■■□□□ 1.25
BLOC1S4Q9NUP1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.86■■□□□ 1.25
BLOC1S4Q9NUP1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
BLOC1S4Q9NUP1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
BLOC1S4Q9NUP1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
BLOC1S4Q9NUP1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
BLOC1S4Q9NUP1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.86■■□□□ 1.25
BLOC1S4Q9NUP1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.86■■□□□ 1.25
BLOC1S4Q9NUP1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 GABARAPL3-202ENST00000624044 1851 ntBASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 CYP21A1P-202ENST00000354927 1481 ntBASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.85■■□□□ 1.25
BLOC1S4Q9NUP1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
BLOC1S4Q9NUP1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.25
BLOC1S4Q9NUP1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
BLOC1S4Q9NUP1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.83■■□□□ 1.25
BLOC1S4Q9NUP1 AC020907.5-201ENST00000624372 1936 ntBASIC22.83■■□□□ 1.25
BLOC1S4Q9NUP1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
BLOC1S4Q9NUP1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
BLOC1S4Q9NUP1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
BLOC1S4Q9NUP1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.83■■□□□ 1.25
BLOC1S4Q9NUP1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.83■■□□□ 1.25
BLOC1S4Q9NUP1 AL050303.2-201ENST00000619798 666 ntBASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms